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- W3215480516 abstract "In mathematical phylogenetics, types of events in a gene tree T are formalized by vertex labels t(v) and set-valued edge labels (lambda (e)). The orthology and paralogy relations between genes are a special case of a map (delta ) on the pairs of leaves of T defined by (delta (x,y)=q) if the last common ancestor ({text {lca}}(x,y)) of x and y is labeled by an event type q, e.g., speciation or duplication. Similarly, a map (varepsilon ) with (min varepsilon (x,y)) if (min lambda (e)) for at least one edge e along the path from ({text {lca}}(x,y)) to y generalizes xenology, i.e., horizontal gene transfer. We show that a pair of maps ((delta ,varepsilon )) derives from a tree ((T,t,lambda )) in this manner if and only if there exists a common refinement of the (unique) least-resolved vertex labeled tree ((T_{delta },t_{delta })) that explains (delta ) and the (unique) least-resolved edge labeled tree ((T_{varepsilon },lambda _{varepsilon })) that explains (varepsilon ) (provided both trees exist). This result remains true if certain combinations of labels at incident vertices and edges are forbidden." @default.
- W3215480516 created "2021-12-06" @default.
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- W3215480516 date "2021-01-01" @default.
- W3215480516 modified "2023-10-04" @default.
- W3215480516 title "Combining Orthology and Xenology Data in a Common Phylogenetic Tree" @default.
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- W3215480516 doi "https://doi.org/10.1007/978-3-030-91814-9_5" @default.
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