FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W3217188434> ?p ?o ?g. }

• W3217188434 abstract "Abstract As phylogenomics focuses on comprehensive taxon sampling at the species and population/subspecies levels, incorporating genomic data from historical specimens has become increasingly common. While historical samples can fill critical gaps in our understanding of the evolutionary history of diverse groups, they also introduce additional sources of phylogenomic uncertainty, making it difficult to discern novel evolutionary relationships from artifacts caused by sample quality issues. These problems highlight the need for improved strategies to disentangle artifactual patterns from true biological signal as historical specimens become more prevalent in phylogenomic datasets. Here, we tested the limits of historical specimen-driven phylogenomics to resolve subspecies-level relationships within a highly polytypic family, the New World quails (Odontophoridae), using thousands of ultraconserved elements (UCEs). We found that relationships at and above the species-level were well-resolved and highly supported across all analyses, with the exception of discordant relationships within the two most polytypic genera which included many historical specimens. We examined the causes of discordance and found that inferring phylogenies from subsets of taxa resolved the disagreements, suggesting that analyzing subclades can help remove artifactual causes of discordance in datasets that include historical samples. At the subspecies-level, we found well-resolved geographic structure within the two most polytypic genera, including the most polytypic species in this family, Northern Bobwhites ( Colinus virginianus ), demonstrating that variable sites within UCEs are capable of resolving phylogenetic structure below the species level. Our results highlight the importance of complete taxonomic sampling for resolving relationships among polytypic species, often through the inclusion of historical specimens, and we propose an integrative strategy for understanding and addressing the uncertainty that historical samples sometimes introduce to phylogenetic analyses." @default.
• W3217188434 created "2021-12-06" @default.
• W3217188434 creator A5019409579 @default.
• W3217188434 creator A5025026192 @default.
• W3217188434 creator A5038245887 @default.
• W3217188434 creator A5054097057 @default.
• W3217188434 creator A5060271364 @default.
• W3217188434 creator A5087747590 @default.
• W3217188434 date "2021-11-20" @default.
• W3217188434 modified "2023-09-27" @default.
• W3217188434 title "Historical specimens and the limits of subspecies phylogenomics in the New World quails (Odontophoridae)" @default.
• W3217188434 cites W1529325410 @default.
• W3217188434 cites W1961824641 @default.
• W3217188434 cites W1986575796 @default.
• W3217188434 cites W1988363710 @default.
• W3217188434 cites W2047684679 @default.
• W3217188434 cites W2072806391 @default.
• W3217188434 cites W2081545011 @default.
• W3217188434 cites W2088238164 @default.
• W3217188434 cites W2096561868 @default.
• W3217188434 cites W2099111652 @default.
• W3217188434 cites W2103441770 @default.
• W3217188434 cites W2106710753 @default.
• W3217188434 cites W2107555182 @default.
• W3217188434 cites W2115888213 @default.
• W3217188434 cites W2120663060 @default.
• W3217188434 cites W2120902911 @default.
• W3217188434 cites W2122302865 @default.
• W3217188434 cites W2131271579 @default.
• W3217188434 cites W2140144089 @default.
• W3217188434 cites W2140283421 @default.
• W3217188434 cites W2146047814 @default.
• W3217188434 cites W2146341019 @default.
• W3217188434 cites W2157455020 @default.
• W3217188434 cites W2160378127 @default.
• W3217188434 cites W2167227133 @default.
• W3217188434 cites W2263985547 @default.
• W3217188434 cites W2314968867 @default.
• W3217188434 cites W2332066208 @default.
• W3217188434 cites W2350237947 @default.
• W3217188434 cites W2481462603 @default.
• W3217188434 cites W2510851398 @default.
• W3217188434 cites W2515298508 @default.
• W3217188434 cites W2580899508 @default.
• W3217188434 cites W2601425645 @default.
• W3217188434 cites W2735283510 @default.
• W3217188434 cites W2763307239 @default.
• W3217188434 cites W2774809749 @default.
• W3217188434 cites W2927698109 @default.
• W3217188434 cites W2931899952 @default.
• W3217188434 cites W2949867654 @default.
• W3217188434 cites W2951890991 @default.
• W3217188434 cites W2954564149 @default.
• W3217188434 cites W2962766773 @default.
• W3217188434 cites W2965085061 @default.
• W3217188434 cites W2972201021 @default.
• W3217188434 cites W2979995063 @default.
• W3217188434 cites W2996620010 @default.
• W3217188434 cites W3032507263 @default.
• W3217188434 cites W3085496950 @default.
• W3217188434 cites W3105939366 @default.
• W3217188434 cites W3111045446 @default.
• W3217188434 cites W3212304005 @default.
• W3217188434 cites W3216726589 @default.
• W3217188434 cites W4231784440 @default.
• W3217188434 cites W4285074597 @default.
• W3217188434 cites W53386345 @default.
• W3217188434 doi "https://doi.org/10.1101/2021.11.18.468700" @default.
• W3217188434 hasPublicationYear "2021" @default.
• W3217188434 type Work @default.
• W3217188434 sameAs 3217188434 @default.
• W3217188434 citedByCount "0" @default.
• W3217188434 crossrefType "posted-content" @default.
• W3217188434 hasAuthorship W3217188434A5019409579 @default.
• W3217188434 hasAuthorship W3217188434A5025026192 @default.
• W3217188434 hasAuthorship W3217188434A5038245887 @default.
• W3217188434 hasAuthorship W3217188434A5054097057 @default.
• W3217188434 hasAuthorship W3217188434A5060271364 @default.
• W3217188434 hasAuthorship W3217188434A5087747590 @default.
• W3217188434 hasBestOaLocation W32171884341 @default.
• W3217188434 hasConcept C104317684 @default.
• W3217188434 hasConcept C17966761 @default.
• W3217188434 hasConcept C18903297 @default.
• W3217188434 hasConcept C193252679 @default.
• W3217188434 hasConcept C44465124 @default.
• W3217188434 hasConcept C55493867 @default.
• W3217188434 hasConcept C70343354 @default.
• W3217188434 hasConcept C71640776 @default.
• W3217188434 hasConcept C78458016 @default.
• W3217188434 hasConcept C86803240 @default.
• W3217188434 hasConcept C90132467 @default.
• W3217188434 hasConceptScore W3217188434C104317684 @default.
• W3217188434 hasConceptScore W3217188434C17966761 @default.
• W3217188434 hasConceptScore W3217188434C18903297 @default.
• W3217188434 hasConceptScore W3217188434C193252679 @default.
• W3217188434 hasConceptScore W3217188434C44465124 @default.
• W3217188434 hasConceptScore W3217188434C55493867 @default.
• W3217188434 hasConceptScore W3217188434C70343354 @default.
• W3217188434 hasConceptScore W3217188434C71640776 @default.
• W3217188434 hasConceptScore W3217188434C78458016 @default.

• next