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- W375809258 abstract "We consider SBML models represented in the Reactome web site [1]. SBML descriptions do not represent executable models, while the importance for biologists of having formal models, which both are executable and have a graphical representation, is more and more recognized [2, 3]. And a tool based on formal semantics, which allows a biologist to both visualize and simulate a biological model, can be very useful, because it helps to remove ambiguity and to increase confidence on the model itself. This holds, in particular, for wiki-like collaborative environments, where it facilitates the consensus reaching phase of the model construction process. One of the main goals of the SIMBIOSYS project is to build a tool able to automatically derive a StateChart [4] representing the SBML description of a biological pathway or sub-event. This would allow to have both an executable representation of the SBML description and a representation that can be read at various levels of aggregation, as described below." @default.
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- W375809258 date "2010-01-01" @default.
- W375809258 modified "2023-09-27" @default.
- W375809258 title "A Statechart based representation for SBML descriptions" @default.
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