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- W4200393259 abstract "Sesamum indicum is an ancient oil crop grown in tropical and subtropical areas of the world. We have analyzed 23,538 coding sequences (CDS) of S. indicum to understand the factors shaping codon usage in this important oil crop plant. We identified eleven highly preferred codons in S. indicum that have AT-endings. The slope of a neutrality plot was less than one while effective number of codons (ENC) plot showed distribution above and below the standard curve. There is a significant relationship between protein length and relative synonymous codon usage (RSCU) at the primary axis while there is a weak correlation between protein length and Nc values. Correspondence analysis conducted on RSCU values differentiated CDS based on their GC content and their characteristic feature and showed a discrete distribution. Moreover, by determining codon usage, we found out that majority of the lignan biosynthesis related genes showed a weaker codon usage bias. These results provide insights into understanding codon evolution in sesame." @default.
- W4200393259 created "2021-12-31" @default.
- W4200393259 creator A5044253012 @default.
- W4200393259 creator A5072823565 @default.
- W4200393259 date "2022-01-01" @default.
- W4200393259 modified "2023-09-30" @default.
- W4200393259 title "Genome-wide analysis of codon usage in sesame (Sesamum indicum L.)" @default.
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- W4200393259 doi "https://doi.org/10.1016/j.heliyon.2021.e08687" @default.
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