Matches in SemOpenAlex for { <https://semopenalex.org/work/W4200432878> ?p ?o ?g. }
Showing items 1 to 57 of
57
with 100 items per page.
- W4200432878 abstract "Linkage disequilibrium (LD) across the genome provides information to identify the genes and variations related to quantitative traits in genome wide association studies (GWAS) and for the implementation of genomic selection. LD can also be used to evaluate genetic diversity, population structure and reveal genomic regions affected by selection. A set of 58 water buffaloes, comprising AZI, KHU and MAZ breeds from Iran, KUN and NIL from Pakistan, and buffalo from Turkey (ANA) and Egypt (EGY), were used to assess LD structure and calculate Ne. The values of corrected r2 for AZI, KHU, MAZ, three pooled Iranian breeds (IR), ANA, EGY, KUN, NIL and two pooled Pakistani breeds (PAK) populations were 0.26, 0.27, 0.26, 0.24, 0.28, 0.27, 23, 24 and 0.22, respectively. The corrected r2 between the SNPs decreased with increasing physical distance from 100Kb to 1Mb. The LD values for AZI, KHU, MAZ, IRI, ANA, EGY, KUN, NIL and PAK populations were 0.24, 0.25, 0.23, 0.16, 0.23, 0.24, 22, 22 and 0.21 for distance less than 100kb, respectively, which reduced rapidly to 0.048, 0.053, 0.075, 0.018, 0.042, 0.059, 0.074, 0.46 and 0.024, for a distance of 1Mb. In all the populations, the decay rate was small for distances greater than 2Mb up to the longest studied distance (15Mb). Using unrelated samples, the r2 values from adjacent SNPs indicated that SNPs from Affymetrix Axiom 90K SNP genomic array could be used for GWAS and genomic selection in these populations. The Persistency of LD phase (PLDP) between populations was assessed and results showed that PLPD values between all studied populations was more than 0.9 for distances less than 100Kbp. Therefore, it should be possible to use genomic information from some of these populations to predict genetic effects in another." @default.
- W4200432878 created "2021-12-31" @default.
- W4200432878 date "2021-12-07" @default.
- W4200432878 modified "2023-09-28" @default.
- W4200432878 title "Image10.PNG" @default.
- W4200432878 doi "https://doi.org/10.3389/fgene.2021.608186.s002" @default.
- W4200432878 hasPublicationYear "2021" @default.
- W4200432878 type Work @default.
- W4200432878 citedByCount "0" @default.
- W4200432878 crossrefType "component" @default.
- W4200432878 hasBestOaLocation W42004328781 @default.
- W4200432878 hasConcept C104317684 @default.
- W4200432878 hasConcept C106208931 @default.
- W4200432878 hasConcept C135763542 @default.
- W4200432878 hasConcept C138592617 @default.
- W4200432878 hasConcept C139275648 @default.
- W4200432878 hasConcept C141231307 @default.
- W4200432878 hasConcept C153209595 @default.
- W4200432878 hasConcept C186413461 @default.
- W4200432878 hasConcept C2908647359 @default.
- W4200432878 hasConcept C35605836 @default.
- W4200432878 hasConcept C54355233 @default.
- W4200432878 hasConcept C68873052 @default.
- W4200432878 hasConcept C71924100 @default.
- W4200432878 hasConcept C86803240 @default.
- W4200432878 hasConcept C99454951 @default.
- W4200432878 hasConceptScore W4200432878C104317684 @default.
- W4200432878 hasConceptScore W4200432878C106208931 @default.
- W4200432878 hasConceptScore W4200432878C135763542 @default.
- W4200432878 hasConceptScore W4200432878C138592617 @default.
- W4200432878 hasConceptScore W4200432878C139275648 @default.
- W4200432878 hasConceptScore W4200432878C141231307 @default.
- W4200432878 hasConceptScore W4200432878C153209595 @default.
- W4200432878 hasConceptScore W4200432878C186413461 @default.
- W4200432878 hasConceptScore W4200432878C2908647359 @default.
- W4200432878 hasConceptScore W4200432878C35605836 @default.
- W4200432878 hasConceptScore W4200432878C54355233 @default.
- W4200432878 hasConceptScore W4200432878C68873052 @default.
- W4200432878 hasConceptScore W4200432878C71924100 @default.
- W4200432878 hasConceptScore W4200432878C86803240 @default.
- W4200432878 hasConceptScore W4200432878C99454951 @default.
- W4200432878 hasLocation W42004328781 @default.
- W4200432878 hasOpenAccess W4200432878 @default.
- W4200432878 hasPrimaryLocation W42004328781 @default.
- W4200432878 hasRelatedWork W12125328 @default.
- W4200432878 hasRelatedWork W13522648 @default.
- W4200432878 hasRelatedWork W28667950 @default.
- W4200432878 hasRelatedWork W29540444 @default.
- W4200432878 hasRelatedWork W36325499 @default.
- W4200432878 hasRelatedWork W36344184 @default.
- W4200432878 hasRelatedWork W36895610 @default.
- W4200432878 hasRelatedWork W4165346 @default.
- W4200432878 hasRelatedWork W5957378 @default.
- W4200432878 hasRelatedWork W9890579 @default.
- W4200432878 isParatext "false" @default.
- W4200432878 isRetracted "false" @default.
- W4200432878 workType "paratext" @default.
