Matches in SemOpenAlex for { <https://semopenalex.org/work/W4206028933> ?p ?o ?g. }
- W4206028933 abstract "Plastid genomes (plastomes) have a quadripartite structure, but some species have drastically reduced or lost inverted repeat (IR) regions. IR regions are important for genome stability and the evolution rate. In the evolutionary process of gymnosperms, the typical IRs of conifers were lost, possibly affecting the evolutionary rate and selection pressure of genomic protein-coding genes. In this study, we selected 78 gymnosperm species (51 genera, 13 families) for evolutionary analysis. The selection pressure analysis results showed that negative selection effects were detected in all 50 common genes. Among them, six genes in conifers had higher ω values than non-conifers, and 12 genes had lower ω values. The evolutionary rate analysis results showed that 9 of 50 common genes differed between conifers and non-conifers. It is more obvious that in non-conifers, the rates of psbA (trst, trsv, ratio, dN, dS, and ω) were 2.6- to 3.1-fold of conifers. In conifers, trsv, ratio, dN, dS, and ω of ycf2 were 1.2- to 3.6-fold of non-conifers. In addition, the evolution rate of ycf2 in the IR was significantly reduced. psbA is undergoing dynamic change, with an abnormally high evolution rate as a small portion of it enters the IR region. Although conifers have lost the typical IR regions, we detected no change in the substitution rate or selection pressure of most protein-coding genes due to gene function, plant habitat, or newly acquired IRs." @default.
- W4206028933 created "2022-01-26" @default.
- W4206028933 creator A5025735969 @default.
- W4206028933 creator A5059932826 @default.
- W4206028933 creator A5071779307 @default.
- W4206028933 creator A5080234213 @default.
- W4206028933 creator A5084689977 @default.
- W4206028933 creator A5085050614 @default.
- W4206028933 date "2022-01-01" @default.
- W4206028933 modified "2023-10-14" @default.
- W4206028933 title "Loss of the IR region in conifer plastomes: Changes in the selection pressure and substitution rate of protein‐coding genes" @default.
- W4206028933 cites W1747464137 @default.
- W4206028933 cites W1899220380 @default.
- W4206028933 cites W1996515220 @default.
- W4206028933 cites W2004068865 @default.
- W4206028933 cites W2016177735 @default.
- W4206028933 cites W2016893340 @default.
- W4206028933 cites W2023564241 @default.
- W4206028933 cites W2029150398 @default.
- W4206028933 cites W2049872853 @default.
- W4206028933 cites W2053351512 @default.
- W4206028933 cites W2055863762 @default.
- W4206028933 cites W2064212541 @default.
- W4206028933 cites W2067001241 @default.
- W4206028933 cites W2072993689 @default.
- W4206028933 cites W2078518723 @default.
- W4206028933 cites W2080409301 @default.
- W4206028933 cites W2084503255 @default.
- W4206028933 cites W2087360477 @default.
- W4206028933 cites W2090106516 @default.
- W4206028933 cites W2103651180 @default.
- W4206028933 cites W2106775576 @default.
- W4206028933 cites W2110335151 @default.
- W4206028933 cites W2113180996 @default.
- W4206028933 cites W2117071791 @default.
- W4206028933 cites W2126718812 @default.
- W4206028933 cites W2128221045 @default.
- W4206028933 cites W2128880918 @default.
- W4206028933 cites W2131271579 @default.
- W4206028933 cites W2136846721 @default.
- W4206028933 cites W2138178197 @default.
- W4206028933 cites W2141052558 @default.
- W4206028933 cites W2144863536 @default.
- W4206028933 cites W2146574773 @default.
- W4206028933 cites W2147096538 @default.
- W4206028933 cites W2147551838 @default.
- W4206028933 cites W2147808718 @default.
- W4206028933 cites W2149096476 @default.
- W4206028933 cites W2157452430 @default.
- W4206028933 cites W2158051562 @default.
- W4206028933 cites W2158241205 @default.
- W4206028933 cites W2159834994 @default.
- W4206028933 cites W2160969485 @default.
- W4206028933 cites W2161444534 @default.
- W4206028933 cites W2161892713 @default.
- W4206028933 cites W2163336815 @default.
- W4206028933 cites W2163654520 @default.
- W4206028933 cites W2164220681 @default.
- W4206028933 cites W2167326032 @default.
- W4206028933 cites W2168596253 @default.
- W4206028933 cites W2172966706 @default.
- W4206028933 cites W2344402655 @default.
- W4206028933 cites W2392342062 @default.
- W4206028933 cites W2411162987 @default.
- W4206028933 cites W2433678716 @default.
- W4206028933 cites W2462987075 @default.
- W4206028933 cites W2582257258 @default.
- W4206028933 cites W2605533171 @default.
- W4206028933 cites W2609499265 @default.
- W4206028933 cites W2751670245 @default.
- W4206028933 cites W2775558344 @default.
- W4206028933 cites W2799524357 @default.
- W4206028933 cites W2808886394 @default.
- W4206028933 cites W2897497433 @default.
- W4206028933 cites W2898566854 @default.
- W4206028933 cites W2953289982 @default.
- W4206028933 cites W3012465805 @default.
- W4206028933 cites W3036514080 @default.
- W4206028933 cites W3082545525 @default.
- W4206028933 cites W4230357098 @default.
- W4206028933 doi "https://doi.org/10.1002/ece3.8499" @default.
- W4206028933 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/35136556" @default.
- W4206028933 hasPublicationYear "2022" @default.
- W4206028933 type Work @default.
- W4206028933 citedByCount "3" @default.
- W4206028933 countsByYear W42060289332022 @default.
- W4206028933 countsByYear W42060289332023 @default.
- W4206028933 crossrefType "journal-article" @default.
- W4206028933 hasAuthorship W4206028933A5025735969 @default.
- W4206028933 hasAuthorship W4206028933A5059932826 @default.
- W4206028933 hasAuthorship W4206028933A5071779307 @default.
- W4206028933 hasAuthorship W4206028933A5080234213 @default.
- W4206028933 hasAuthorship W4206028933A5084689977 @default.
- W4206028933 hasAuthorship W4206028933A5085050614 @default.
- W4206028933 hasBestOaLocation W42060289331 @default.
- W4206028933 hasConcept C104317684 @default.
- W4206028933 hasConcept C138025448 @default.
- W4206028933 hasConcept C141231307 @default.
- W4206028933 hasConcept C2777949028 @default.
- W4206028933 hasConcept C2781002682 @default.