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- W4206456975 abstract "Abstract Bacterial pathogens identified as Dickeya sp. have recently been associated with a corm rot of wetland taro on Oahu, Hawaii, but the species designation of these strains was unclear. A Gram-negative, pectinolytic bacterial strain PL65 T isolated from an infected taro corm was subjected to polyphasic analysis to determine its genomic and phenotypic characteristics. Multi-locus sequence analyses (MLSA) based on five housekeeping genes ( dnaA, gapA, gyrB, atpD , and purA ) revealed that Dickeya zeae and D. oryzae , were the closest relatives. Phylogenetic analysis based on 463 core gene sequences clearly showed two potentially new species within Dickeya oryzae. In silico DNA– DNA hybridization value of strain PL65 T with 12 Type strains of Dickeya species was <68%. Average nucleotide identity (ANI) analysis revealed that PL65 T was at the margin of the species delineation cut-off values with a 96% ANI value. The metabolic profile of strain PL65 T using BIOLOG differentiated it from the type strains of all other known species of Dickeya . Based on the results of genome-to-genome comparisons and phenotypic data presented in this report, we propose establishment of a new species, Dickeya colocasiae sp. nov. with strain PL65 T as the type strain (ICMP 24361 T )." @default.
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- W4206456975 date "2022-01-15" @default.
- W4206456975 modified "2023-10-03" @default.
- W4206456975 title "<i>Dickeya colocasiae</i> sp. nov. isolated from wetland taro, <i>Colocasia esculentum</i>" @default.
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- W4206456975 doi "https://doi.org/10.1101/2022.01.14.476417" @default.
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