Matches in SemOpenAlex for { <https://semopenalex.org/work/W4210350794> ?p ?o ?g. }
- W4210350794 abstract "We introduce AGAMEMNON ( https://github.com/ivlachos/agamemnon ) for the acquisition of microbial abundances from shotgun metagenomics and metatranscriptomic samples, single-microbe sequencing experiments, or sequenced host samples. AGAMEMNON delivers accurate abundances at genus, species, and strain resolution. It incorporates a time and space-efficient indexing scheme for fast pattern matching, enabling indexing and analysis of vast datasets with widely available computational resources. Host-specific modules provide exceptional accuracy for microbial abundance quantification from tissue RNA/DNA sequencing, enabling the expansion of experiments lacking metagenomic/metatranscriptomic analyses. AGAMEMNON provides an R-Shiny application, permitting performance of investigations and visualizations from a graphics interface." @default.
- W4210350794 created "2022-02-08" @default.
- W4210350794 creator A5014584023 @default.
- W4210350794 creator A5023979383 @default.
- W4210350794 creator A5028361756 @default.
- W4210350794 creator A5042613823 @default.
- W4210350794 creator A5043236998 @default.
- W4210350794 creator A5079235139 @default.
- W4210350794 creator A5084654971 @default.
- W4210350794 date "2022-01-31" @default.
- W4210350794 modified "2023-09-26" @default.
- W4210350794 title "AGAMEMNON: an Accurate metaGenomics And MEtatranscriptoMics quaNtificatiON analysis suite" @default.
- W4210350794 cites W1215905996 @default.
- W4210350794 cites W1496933752 @default.
- W4210350794 cites W1557339302 @default.
- W4210350794 cites W1964954110 @default.
- W4210350794 cites W1978709058 @default.
- W4210350794 cites W1999574084 @default.
- W4210350794 cites W2026006003 @default.
- W4210350794 cites W2040412593 @default.
- W4210350794 cites W2085631282 @default.
- W4210350794 cites W2092450605 @default.
- W4210350794 cites W2102278945 @default.
- W4210350794 cites W2110417468 @default.
- W4210350794 cites W2113114502 @default.
- W4210350794 cites W2116617401 @default.
- W4210350794 cites W2119180969 @default.
- W4210350794 cites W2122414480 @default.
- W4210350794 cites W2130731460 @default.
- W4210350794 cites W2131186249 @default.
- W4210350794 cites W2137526110 @default.
- W4210350794 cites W2142678031 @default.
- W4210350794 cites W2143842034 @default.
- W4210350794 cites W2146512944 @default.
- W4210350794 cites W2149479309 @default.
- W4210350794 cites W2157539385 @default.
- W4210350794 cites W2158485828 @default.
- W4210350794 cites W2159954944 @default.
- W4210350794 cites W2170551349 @default.
- W4210350794 cites W2171571559 @default.
- W4210350794 cites W2177333410 @default.
- W4210350794 cites W2179438025 @default.
- W4210350794 cites W2259938310 @default.
- W4210350794 cites W2337747100 @default.
- W4210350794 cites W2345658906 @default.
- W4210350794 cites W2474973645 @default.
- W4210350794 cites W2508929473 @default.
- W4210350794 cites W2533383604 @default.
- W4210350794 cites W2558041282 @default.
- W4210350794 cites W2592770357 @default.
- W4210350794 cites W2592811885 @default.
- W4210350794 cites W2611418622 @default.
- W4210350794 cites W2618833496 @default.
- W4210350794 cites W2620147451 @default.
- W4210350794 cites W2624135745 @default.
- W4210350794 cites W2734511552 @default.
- W4210350794 cites W2736047874 @default.
- W4210350794 cites W2759261668 @default.
- W4210350794 cites W2766903152 @default.
- W4210350794 cites W2788876413 @default.
- W4210350794 cites W2789843538 @default.
- W4210350794 cites W2792647356 @default.
- W4210350794 cites W2797413896 @default.
- W4210350794 cites W2804114659 @default.
- W4210350794 cites W2883814206 @default.
- W4210350794 cites W2888433179 @default.
- W4210350794 cites W2949087252 @default.
- W4210350794 cites W2950150251 @default.
- W4210350794 cites W2963158913 @default.
- W4210350794 cites W2963629592 @default.
- W4210350794 cites W2964849163 @default.
- W4210350794 cites W2990249310 @default.
- W4210350794 cites W2990618091 @default.
- W4210350794 cites W2991113705 @default.
- W4210350794 cites W3010810358 @default.
- W4210350794 cites W3094448726 @default.
- W4210350794 cites W3159504416 @default.
- W4210350794 cites W3168724350 @default.
- W4210350794 cites W3191036479 @default.
- W4210350794 cites W4210350794 @default.
- W4210350794 cites W4255738661 @default.
- W4210350794 doi "https://doi.org/10.1186/s13059-022-02610-4" @default.
- W4210350794 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/35101114" @default.
- W4210350794 hasPublicationYear "2022" @default.
- W4210350794 type Work @default.
- W4210350794 citedByCount "3" @default.
- W4210350794 countsByYear W42103507942022 @default.
- W4210350794 countsByYear W42103507942023 @default.
- W4210350794 crossrefType "journal-article" @default.
- W4210350794 hasAuthorship W4210350794A5014584023 @default.
- W4210350794 hasAuthorship W4210350794A5023979383 @default.
- W4210350794 hasAuthorship W4210350794A5028361756 @default.
- W4210350794 hasAuthorship W4210350794A5042613823 @default.
- W4210350794 hasAuthorship W4210350794A5043236998 @default.
- W4210350794 hasAuthorship W4210350794A5079235139 @default.
- W4210350794 hasAuthorship W4210350794A5084654971 @default.
- W4210350794 hasBestOaLocation W42103507941 @default.
- W4210350794 hasConcept C101985253 @default.
- W4210350794 hasConcept C104317684 @default.
- W4210350794 hasConcept C126831891 @default.