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- W4211012535 abstract "We present a multi-scale approach aiming at studying DNA immersed in the external field generated by a protein. Our model captures different levels of detail by coupling oxDNA coarse-grained model with a variable representation of a rigid protein -covering the range from coarse grained to full atomistic. The cross-interactions between the nucleic acids and the protein are defined via a Lennard-Jones potential plus Debye interactions that account for the implicit effect of salt on DNA electrostatics." @default.
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- W4211012535 date "2022-02-01" @default.
- W4211012535 modified "2023-10-14" @default.
- W4211012535 title "A coarse-grained representation of DNA immersed in an external protein force-field" @default.
- W4211012535 doi "https://doi.org/10.1016/j.bpj.2021.11.1669" @default.
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