Matches in SemOpenAlex for { <https://semopenalex.org/work/W4221075362> ?p ?o ?g. }
- W4221075362 endingPage "104662" @default.
- W4221075362 startingPage "104662" @default.
- W4221075362 abstract "microRNAs (miRNAs) are known as one of the small non-coding RNA molecules that control the expression of genes at the RNA level, while some operate at the DNA level. They typically range from 20 to 24 nucleotides in length and can be found in the plant and animal kingdoms as well as in some viruses. Computational approaches have overcome the limitations of the experimental methods and have performed well in identifying miRNAs. Compared to mature miRNAs, precursor miRNAs (pre-miRNAs) are long and have a hairpin loop structure with structural features. Therefore, most in-silico tools are implemented for pre-miRNA identification. This study presents a multilayer perceptron (MLP) based classifier implemented using 180 features under sequential, structural, and thermodynamic feature categories for plant pre-miRNA identification. This classifier has a 92% accuracy, a 94% specificity, and a 90% sensitivity. We have further tested this model with other small non-coding RNA types and obtained 78% accuracy. Furthermore, we introduce a novel dataset to train and test machine learning models, addressing the overlapping data issue in the positive training and testing datasets presented in PlantMiRNAPred for the classification of real and pseudo-plant pre-miRNAs. The new dataset and the classifier that can be used with any plant species are deployed on a web server freely accessible at http://mirnafinder.shyaman.me/." @default.
- W4221075362 created "2022-04-03" @default.
- W4221075362 creator A5000349066 @default.
- W4221075362 creator A5006235076 @default.
- W4221075362 creator A5010719226 @default.
- W4221075362 creator A5021169741 @default.
- W4221075362 creator A5035656607 @default.
- W4221075362 date "2022-06-01" @default.
- W4221075362 modified "2023-09-27" @default.
- W4221075362 title "miRNAFinder: A comprehensive web resource for plant Pre-microRNA classification" @default.
- W4221075362 cites W1632334713 @default.
- W4221075362 cites W1920564293 @default.
- W4221075362 cites W1954076721 @default.
- W4221075362 cites W1977923143 @default.
- W4221075362 cites W1994814273 @default.
- W4221075362 cites W2020878700 @default.
- W4221075362 cites W2042325491 @default.
- W4221075362 cites W2046164383 @default.
- W4221075362 cites W2047546334 @default.
- W4221075362 cites W2050298867 @default.
- W4221075362 cites W2078899492 @default.
- W4221075362 cites W2083761491 @default.
- W4221075362 cites W2088926042 @default.
- W4221075362 cites W2100928957 @default.
- W4221075362 cites W2101374269 @default.
- W4221075362 cites W2103250001 @default.
- W4221075362 cites W2114973325 @default.
- W4221075362 cites W2121190624 @default.
- W4221075362 cites W2122439839 @default.
- W4221075362 cites W2123994260 @default.
- W4221075362 cites W2131388056 @default.
- W4221075362 cites W2135015580 @default.
- W4221075362 cites W2140415861 @default.
- W4221075362 cites W2140751493 @default.
- W4221075362 cites W2141292707 @default.
- W4221075362 cites W2141521804 @default.
- W4221075362 cites W2154513100 @default.
- W4221075362 cites W2168230240 @default.
- W4221075362 cites W2174160207 @default.
- W4221075362 cites W2326905672 @default.
- W4221075362 cites W2411469182 @default.
- W4221075362 cites W2478884298 @default.
- W4221075362 cites W2602538792 @default.
- W4221075362 cites W2624688622 @default.
- W4221075362 cites W2759113846 @default.
- W4221075362 cites W2768053821 @default.
- W4221075362 cites W2898440040 @default.
- W4221075362 cites W2899798803 @default.
- W4221075362 cites W2907617284 @default.
- W4221075362 cites W3004491290 @default.
- W4221075362 cites W4211064852 @default.
- W4221075362 cites W4249371825 @default.
- W4221075362 doi "https://doi.org/10.1016/j.biosystems.2022.104662" @default.
- W4221075362 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/35306049" @default.
- W4221075362 hasPublicationYear "2022" @default.
- W4221075362 type Work @default.
- W4221075362 citedByCount "1" @default.
- W4221075362 countsByYear W42210753622022 @default.
- W4221075362 crossrefType "journal-article" @default.
- W4221075362 hasAuthorship W4221075362A5000349066 @default.
- W4221075362 hasAuthorship W4221075362A5006235076 @default.
- W4221075362 hasAuthorship W4221075362A5010719226 @default.
- W4221075362 hasAuthorship W4221075362A5021169741 @default.
- W4221075362 hasAuthorship W4221075362A5035656607 @default.
- W4221075362 hasBestOaLocation W42210753622 @default.
- W4221075362 hasConcept C104317684 @default.
- W4221075362 hasConcept C105795698 @default.
- W4221075362 hasConcept C110875604 @default.
- W4221075362 hasConcept C11392498 @default.
- W4221075362 hasConcept C119857082 @default.
- W4221075362 hasConcept C124101348 @default.
- W4221075362 hasConcept C136764020 @default.
- W4221075362 hasConcept C145059251 @default.
- W4221075362 hasConcept C154945302 @default.
- W4221075362 hasConcept C179518139 @default.
- W4221075362 hasConcept C179717631 @default.
- W4221075362 hasConcept C2775905019 @default.
- W4221075362 hasConcept C33923547 @default.
- W4221075362 hasConcept C41008148 @default.
- W4221075362 hasConcept C50644808 @default.
- W4221075362 hasConcept C54355233 @default.
- W4221075362 hasConcept C67705224 @default.
- W4221075362 hasConcept C70721500 @default.
- W4221075362 hasConcept C86803240 @default.
- W4221075362 hasConcept C95623464 @default.
- W4221075362 hasConceptScore W4221075362C104317684 @default.
- W4221075362 hasConceptScore W4221075362C105795698 @default.
- W4221075362 hasConceptScore W4221075362C110875604 @default.
- W4221075362 hasConceptScore W4221075362C11392498 @default.
- W4221075362 hasConceptScore W4221075362C119857082 @default.
- W4221075362 hasConceptScore W4221075362C124101348 @default.
- W4221075362 hasConceptScore W4221075362C136764020 @default.
- W4221075362 hasConceptScore W4221075362C145059251 @default.
- W4221075362 hasConceptScore W4221075362C154945302 @default.
- W4221075362 hasConceptScore W4221075362C179518139 @default.
- W4221075362 hasConceptScore W4221075362C179717631 @default.
- W4221075362 hasConceptScore W4221075362C2775905019 @default.
- W4221075362 hasConceptScore W4221075362C33923547 @default.