Matches in SemOpenAlex for { <https://semopenalex.org/work/W4224303521> ?p ?o ?g. }
- W4224303521 endingPage "167599" @default.
- W4224303521 startingPage "167599" @default.
- W4224303521 abstract "PDBx/mmCIF, Protein Data Bank Exchange (PDBx) macromolecular Crystallographic Information Framework (mmCIF), has become the data standard for structural biology. With its early roots in the domain of small-molecule crystallography, PDBx/mmCIF provides an extensible data representation that is used for deposition, archiving, remediation, and public dissemination of experimentally determined three-dimensional (3D) structures of biological macromolecules by the Worldwide Protein Data Bank (wwPDB, wwpdb.org). Extensions of PDBx/mmCIF are similarly used for computed structure models by ModelArchive (modelarchive.org), integrative/hybrid structures by PDB-Dev (pdb-dev.wwpdb.org), small angle scattering data by Small Angle Scattering Biological Data Bank SASBDB (sasbdb.org), and for models computed generated with the AlphaFold 2.0 deep learning software suite (alphafold.ebi.ac.uk). Community-driven development of PDBx/mmCIF spans three decades, involving contributions from researchers, software and methods developers in structural sciences, data repository providers, scientific publishers, and professional societies. Having a semantically rich and extensible data framework for representing a wide range of structural biology experimental and computational results, combined with expertly curated 3D biostructure data sets in public repositories, accelerates the pace of scientific discovery. Herein, we describe the architecture of the PDBx/mmCIF data standard, tools used to maintain representations of the data standard, governance, and processes by which data content standards are extended, plus community tools/software libraries available for processing and checking the integrity of PDBx/mmCIF data. Use cases exemplify how the members of the Worldwide Protein Data Bank have used PDBx/mmCIF as the foundation for its pipeline for delivering Findable, Accessible, Interoperable, and Reusable (FAIR) data to many millions of users worldwide." @default.
- W4224303521 created "2022-04-26" @default.
- W4224303521 creator A5001950971 @default.
- W4224303521 creator A5003071304 @default.
- W4224303521 creator A5003906612 @default.
- W4224303521 creator A5006418591 @default.
- W4224303521 creator A5011269879 @default.
- W4224303521 creator A5017228838 @default.
- W4224303521 creator A5017946236 @default.
- W4224303521 creator A5019716785 @default.
- W4224303521 creator A5022765206 @default.
- W4224303521 creator A5032511596 @default.
- W4224303521 creator A5036317076 @default.
- W4224303521 creator A5040824480 @default.
- W4224303521 creator A5042417574 @default.
- W4224303521 creator A5042460017 @default.
- W4224303521 creator A5043891987 @default.
- W4224303521 creator A5048277979 @default.
- W4224303521 creator A5068648875 @default.
- W4224303521 creator A5071896859 @default.
- W4224303521 creator A5073498358 @default.
- W4224303521 creator A5084490031 @default.
- W4224303521 creator A5087973270 @default.
- W4224303521 creator A5091281566 @default.
- W4224303521 date "2022-06-01" @default.
- W4224303521 modified "2023-10-07" @default.
- W4224303521 title "PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology" @default.
- W4224303521 cites W145329232 @default.
- W4224303521 cites W1523199224 @default.
- W4224303521 cites W1527778367 @default.
- W4224303521 cites W1535307372 @default.
- W4224303521 cites W1759488877 @default.
- W4224303521 cites W1937222985 @default.
- W4224303521 cites W1995808589 @default.
- W4224303521 cites W2021064626 @default.
- W4224303521 cites W2029667189 @default.
- W4224303521 cites W2051925784 @default.
- W4224303521 cites W2070942956 @default.
- W4224303521 cites W2091229190 @default.
- W4224303521 cites W2107505802 @default.
- W4224303521 cites W2108921801 @default.
- W4224303521 cites W2114359968 @default.
- W4224303521 cites W2114363966 @default.
- W4224303521 cites W2114850508 @default.
- W4224303521 cites W2116389515 @default.
- W4224303521 cites W2124026197 @default.
- W4224303521 cites W2128484254 @default.
- W4224303521 cites W2131350133 @default.
- W4224303521 cites W2132291850 @default.
- W4224303521 cites W2132629607 @default.
- W4224303521 cites W2145538332 @default.
- W4224303521 cites W2147874841 @default.
- W4224303521 cites W2150306348 @default.
- W4224303521 cites W2152877209 @default.
- W4224303521 cites W2154994578 @default.
- W4224303521 cites W2180441778 @default.
- W4224303521 cites W2302501749 @default.
- W4224303521 cites W2334044140 @default.
- W4224303521 cites W2586302636 @default.
- W4224303521 cites W2786313719 @default.
- W4224303521 cites W2793311671 @default.
- W4224303521 cites W2798242569 @default.
- W4224303521 cites W2898210859 @default.
- W4224303521 cites W2913093503 @default.
- W4224303521 cites W2938491141 @default.
- W4224303521 cites W2950192635 @default.
- W4224303521 cites W2973457155 @default.
- W4224303521 cites W2982977147 @default.
- W4224303521 cites W3093323969 @default.
- W4224303521 cites W3104537585 @default.
- W4224303521 cites W3159719254 @default.
- W4224303521 cites W3162424493 @default.
- W4224303521 cites W3177828909 @default.
- W4224303521 cites W3206116958 @default.
- W4224303521 cites W3206708809 @default.
- W4224303521 cites W4220840634 @default.
- W4224303521 cites W4229743141 @default.
- W4224303521 cites W4238387639 @default.
- W4224303521 cites W4248872320 @default.
- W4224303521 doi "https://doi.org/10.1016/j.jmb.2022.167599" @default.
- W4224303521 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/35460671" @default.
- W4224303521 hasPublicationYear "2022" @default.
- W4224303521 type Work @default.
- W4224303521 citedByCount "23" @default.
- W4224303521 countsByYear W42243035212022 @default.
- W4224303521 countsByYear W42243035212023 @default.
- W4224303521 crossrefType "journal-article" @default.
- W4224303521 hasAuthorship W4224303521A5001950971 @default.
- W4224303521 hasAuthorship W4224303521A5003071304 @default.
- W4224303521 hasAuthorship W4224303521A5003906612 @default.
- W4224303521 hasAuthorship W4224303521A5006418591 @default.
- W4224303521 hasAuthorship W4224303521A5011269879 @default.
- W4224303521 hasAuthorship W4224303521A5017228838 @default.
- W4224303521 hasAuthorship W4224303521A5017946236 @default.
- W4224303521 hasAuthorship W4224303521A5019716785 @default.
- W4224303521 hasAuthorship W4224303521A5022765206 @default.
- W4224303521 hasAuthorship W4224303521A5032511596 @default.
- W4224303521 hasAuthorship W4224303521A5036317076 @default.