Matches in SemOpenAlex for { <https://semopenalex.org/work/W4236036922> ?p ?o ?g. }
Showing items 1 to 67 of
67
with 100 items per page.
- W4236036922 abstract "The global deep subsurface biosphere is thought to be one of the largest reservoirs for microbial life on our planet. This study takes advantage of new sampling technologies and couples them with improvements to DNA sequencing and associated informatics tools to reconstruct the genomes of uncultivated Bacteria and Archaea from fluids collected deep within the subseafloor of the Juan de Fuca Ridge. Here, we generated two metagenomes from borehole observatories located 311 meters apart and, using binning tools, retrieved 98 genomes from metagenomes (GFMs) with completeness > 10%. Of the GFMs, 31 were estimated to be > 90% complete, while an additional 17 were > 70% complete. In most instances, estimated redundancy in the GFMs was < 10%. Phylogenomic analysis revealed 53 bacterial and 45 archaeal GFMs and nearly all were distantly related to known cultivates. In the GFMs, abundant bacteria included Chloroflexi, Nitrospirae, Acetothermia (OP1), EM3, Aminicenantes (OP8), Gammaproteobacteria, and Deltaproteobacteria and abundant archaea included Archaeoglobi, Bathyarchaeota (MCG), and Marine Benthic Group E (MBG-E). In this study, we identified the first near-complete genomes from archaeal and bacterial lineages THSCG, MBG-E, and EM3 and, based on the warm, subsurface and hydrothermally-associated from which these groups tend to be found, propose the names, Geothermarchaeota, Hydrothermarchaeota, and Hydrothermae, respectively. The data set presented here are the first description of Juan de Fuca igneous basement microbial GFMs reported and will provide a platform by which one can perform a higher level interrogation of the many uncultivated lineages presented herein." @default.
- W4236036922 created "2022-05-12" @default.
- W4236036922 creator A5009270171 @default.
- W4236036922 creator A5047107252 @default.
- W4236036922 creator A5048761950 @default.
- W4236036922 date "2016-12-01" @default.
- W4236036922 modified "2023-10-03" @default.
- W4236036922 title "Metagenome sequencing and 98 microbial genomes from Juan de Fuca Ridge flank subsurface fluids" @default.
- W4236036922 doi "https://doi.org/10.7287/peerj.preprints.2613" @default.
- W4236036922 hasPublicationYear "2016" @default.
- W4236036922 type Work @default.
- W4236036922 citedByCount "0" @default.
- W4236036922 crossrefType "posted-content" @default.
- W4236036922 hasAuthorship W4236036922A5009270171 @default.
- W4236036922 hasAuthorship W4236036922A5047107252 @default.
- W4236036922 hasAuthorship W4236036922A5048761950 @default.
- W4236036922 hasBestOaLocation W42360369221 @default.
- W4236036922 hasConcept C104317684 @default.
- W4236036922 hasConcept C127313418 @default.
- W4236036922 hasConcept C141231307 @default.
- W4236036922 hasConcept C15151743 @default.
- W4236036922 hasConcept C151730666 @default.
- W4236036922 hasConcept C2776989901 @default.
- W4236036922 hasConcept C2780147307 @default.
- W4236036922 hasConcept C42062724 @default.
- W4236036922 hasConcept C44465124 @default.
- W4236036922 hasConcept C523546767 @default.
- W4236036922 hasConcept C54355233 @default.
- W4236036922 hasConcept C550995028 @default.
- W4236036922 hasConcept C70343354 @default.
- W4236036922 hasConcept C78458016 @default.
- W4236036922 hasConcept C86803240 @default.
- W4236036922 hasConcept C90132467 @default.
- W4236036922 hasConceptScore W4236036922C104317684 @default.
- W4236036922 hasConceptScore W4236036922C127313418 @default.
- W4236036922 hasConceptScore W4236036922C141231307 @default.
- W4236036922 hasConceptScore W4236036922C15151743 @default.
- W4236036922 hasConceptScore W4236036922C151730666 @default.
- W4236036922 hasConceptScore W4236036922C2776989901 @default.
- W4236036922 hasConceptScore W4236036922C2780147307 @default.
- W4236036922 hasConceptScore W4236036922C42062724 @default.
- W4236036922 hasConceptScore W4236036922C44465124 @default.
- W4236036922 hasConceptScore W4236036922C523546767 @default.
- W4236036922 hasConceptScore W4236036922C54355233 @default.
- W4236036922 hasConceptScore W4236036922C550995028 @default.
- W4236036922 hasConceptScore W4236036922C70343354 @default.
- W4236036922 hasConceptScore W4236036922C78458016 @default.
- W4236036922 hasConceptScore W4236036922C86803240 @default.
- W4236036922 hasConceptScore W4236036922C90132467 @default.
- W4236036922 hasLocation W42360369221 @default.
- W4236036922 hasLocation W42360369222 @default.
- W4236036922 hasLocation W42360369223 @default.
- W4236036922 hasOpenAccess W4236036922 @default.
- W4236036922 hasPrimaryLocation W42360369221 @default.
- W4236036922 hasRelatedWork W1069094 @default.
- W4236036922 hasRelatedWork W11018716 @default.
- W4236036922 hasRelatedWork W22051367 @default.
- W4236036922 hasRelatedWork W2336523 @default.
- W4236036922 hasRelatedWork W25677508 @default.
- W4236036922 hasRelatedWork W26885045 @default.
- W4236036922 hasRelatedWork W29837955 @default.
- W4236036922 hasRelatedWork W39387616 @default.
- W4236036922 hasRelatedWork W5445875 @default.
- W4236036922 hasRelatedWork W30282044 @default.
- W4236036922 isParatext "false" @default.
- W4236036922 isRetracted "false" @default.
- W4236036922 workType "article" @default.