FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4281781372> ?p ?o ?g. }

• W4281781372 abstract "Peanut (Arachis hypogaea L.) is a grain legume crop that originated from South America and is now grown around the world. Peanut growth habit affects the variety's adaptability, planting patterns, mechanized harvesting, disease resistance, and yield. The objective of this study was to map the quantitative trait locus (QTL) associated with peanut growth habit-related traits by combining the genome-wide association analysis (GWAS) and bulked segregant analysis sequencing (BSA-seq) methods.GWAS was performed with 17,223 single nucleotide polymorphisms (SNPs) in 103 accessions of the U.S. mini core collection genotyped using an Affymetrix version 2.0 SNP array. With a total of 12,342 high-quality polymorphic SNPs, the 90 suggestive and significant SNPs associated with lateral branch angle (LBA), main stem height (MSH), lateral branch height (LBL), extent radius (ER), and the index of plant type (IOPT) were identified. These SNPs were distributed among 15 chromosomes. A total of 597 associated candidate genes may have important roles in biological processes, hormone signaling, growth, and development. BSA-seq coupled with specific length amplified fragment sequencing (SLAF-seq) method was used to find the association with LBA, an important trait of the peanut growth habit. A 4.08 Mb genomic region on B05 was associated with LBA. Based on the linkage disequilibrium (LD) decay distance, we narrowed down and confirmed the region within the 160 kb region (144,193,467-144,513,467) on B05. Four candidate genes in this region were involved in plant growth. The expression levels of Araip.E64SW detected by qRT-PCR showed significant difference between 'Jihua 5' and 'M130'.In this study, the SNP (AX-147,251,085 and AX-144,353,467) associated with LBA by GWAS was overlapped with the results in BSA-seq through combined analysis of GWAS and BSA-seq. Based on LD decay distance, the genome range related to LBA on B05 was shortened to 144,193,467-144,513,467. Three candidate genes related to F-box family proteins (Araip.E64SW, Araip.YG1LK, and Araip.JJ6RA) and one candidate gene related to PPP family proteins (Araip.YU281) may be involved in plant growth and development in this genome region. The expression analysis revealed that Araip.E64SW was involved in peanut growth habits. These candidate genes will provide molecular targets in marker-assisted selection for peanut growth habits." @default.
• W4281781372 created "2022-06-13" @default.
• W4281781372 creator A5013025112 @default.
• W4281781372 creator A5019735910 @default.
• W4281781372 creator A5027475930 @default.
• W4281781372 creator A5050493890 @default.
• W4281781372 creator A5059040206 @default.
• W4281781372 creator A5074339191 @default.
• W4281781372 creator A5078864712 @default.
• W4281781372 creator A5088187016 @default.
• W4281781372 date "2022-05-27" @default.
• W4281781372 modified "2023-10-09" @default.
• W4281781372 title "GWAS and bulked segregant analysis reveal the Loci controlling growth habit-related traits in cultivated Peanut (Arachis hypogaea L.)" @default.
• W4281781372 cites W1588726055 @default.
• W4281781372 cites W1606019297 @default.
• W4281781372 cites W165156449 @default.
• W4281781372 cites W1754589438 @default.
• W4281781372 cites W1908305180 @default.
• W4281781372 cites W1975053636 @default.
• W4281781372 cites W1984353972 @default.
• W4281781372 cites W1988697232 @default.
• W4281781372 cites W1999102617 @default.
• W4281781372 cites W2003230917 @default.
• W4281781372 cites W2007954102 @default.
• W4281781372 cites W2010904367 @default.
• W4281781372 cites W2030798154 @default.
• W4281781372 cites W2032457672 @default.
• W4281781372 cites W2032782684 @default.
• W4281781372 cites W2049354794 @default.
• W4281781372 cites W2051979410 @default.
• W4281781372 cites W2056420164 @default.
• W4281781372 cites W2059575544 @default.
• W4281781372 cites W2070287693 @default.
• W4281781372 cites W2071635972 @default.
• W4281781372 cites W2072048460 @default.
• W4281781372 cites W2078540371 @default.
• W4281781372 cites W2086573417 @default.
• W4281781372 cites W2088020080 @default.
• W4281781372 cites W2093049842 @default.
• W4281781372 cites W2104257417 @default.
• W4281781372 cites W2106055990 @default.
• W4281781372 cites W2113280067 @default.
• W4281781372 cites W2115936792 @default.
• W4281781372 cites W2119924680 @default.
• W4281781372 cites W2132164162 @default.
• W4281781372 cites W2139760555 @default.
• W4281781372 cites W2154110613 @default.
• W4281781372 cites W2159326025 @default.
• W4281781372 cites W2160838557 @default.
• W4281781372 cites W2164655883 @default.
• W4281781372 cites W2168133698 @default.
• W4281781372 cites W2169861297 @default.
• W4281781372 cites W2282927931 @default.
• W4281781372 cites W2291901236 @default.
• W4281781372 cites W2407964211 @default.
• W4281781372 cites W2520911739 @default.
• W4281781372 cites W2568189433 @default.
• W4281781372 cites W2604907927 @default.
• W4281781372 cites W2627021542 @default.
• W4281781372 cites W2734669604 @default.
• W4281781372 cites W2742616998 @default.
• W4281781372 cites W2760002149 @default.
• W4281781372 cites W2761510198 @default.
• W4281781372 cites W2789337498 @default.
• W4281781372 cites W2793312133 @default.
• W4281781372 cites W2796587605 @default.
• W4281781372 cites W2802399532 @default.
• W4281781372 cites W2808282895 @default.
• W4281781372 cites W2883322149 @default.
• W4281781372 cites W2890723872 @default.
• W4281781372 cites W2895733251 @default.
• W4281781372 cites W2896952062 @default.
• W4281781372 cites W2898232071 @default.
• W4281781372 cites W2900725275 @default.
• W4281781372 cites W2904143343 @default.
• W4281781372 cites W2904574370 @default.
• W4281781372 cites W2913278649 @default.
• W4281781372 cites W2917639299 @default.
• W4281781372 cites W2951853760 @default.
• W4281781372 cites W3015897676 @default.
• W4281781372 cites W3135624641 @default.
• W4281781372 cites W3142709630 @default.
• W4281781372 cites W4376567118 @default.
• W4281781372 doi "https://doi.org/10.1186/s12864-022-08640-3" @default.
• W4281781372 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/35624420" @default.
• W4281781372 hasPublicationYear "2022" @default.
• W4281781372 type Work @default.
• W4281781372 citedByCount "7" @default.
• W4281781372 countsByYear W42817813722022 @default.
• W4281781372 countsByYear W42817813722023 @default.
• W4281781372 crossrefType "journal-article" @default.
• W4281781372 hasAuthorship W4281781372A5013025112 @default.
• W4281781372 hasAuthorship W4281781372A5019735910 @default.
• W4281781372 hasAuthorship W4281781372A5027475930 @default.
• W4281781372 hasAuthorship W4281781372A5050493890 @default.
• W4281781372 hasAuthorship W4281781372A5059040206 @default.
• W4281781372 hasAuthorship W4281781372A5074339191 @default.
• W4281781372 hasAuthorship W4281781372A5078864712 @default.
• W4281781372 hasAuthorship W4281781372A5088187016 @default.
• W4281781372 hasBestOaLocation W42817813721 @default.

• next