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- W4283394336 abstract "SUMMARY De novo genes are derived from non‐coding sequences, and they can play essential roles in organisms. Cultivated peanut ( Arachis hypogaea ) is a major oil and protein crop derived from a cross between Arachis duranensis and Arachis ipaensis . However, few de novo genes have been documented in Arachis . Here, we identified 381 de novo genes in A. hypogaea cv. Tifrunner based on comparison with five closely related Arachis species. There are distinct differences in gene expression patterns and gene structures between conserved and de novo genes. The identified de novo genes originated from ancestral sequence regions associated with metabolic and biosynthetic processes, and they were subsequently integrated into existing regulatory networks. De novo paralogs and homoeologs were identified in A. hypogaea cv. Tifrunner. De novo paralogs and homoeologs with conserved expression have mismatching cis ‐acting elements under normal growth conditions. De novo genes potentially have pluripotent functions in responses to biotic stresses as well as in growth and development based on quantitative trait locus data. This work provides a foundation for future research examining gene birth processes and gene function in Arachis and related taxa." @default.
- W4283394336 created "2022-06-25" @default.
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- W4283394336 date "2022-07-04" @default.
- W4283394336 modified "2023-09-27" @default.
- W4283394336 title "<i>De novo</i> genes in <i>Arachis hypogaea</i> cv. Tifrunner: systematic identification, molecular evolution, and potential contributions to cultivated peanut" @default.
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- W4283394336 doi "https://doi.org/10.1111/tpj.15875" @default.
- W4283394336 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/35748398" @default.
- W4283394336 hasPublicationYear "2022" @default.
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