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• W4289173660 startingPage "8503" @default.
• W4289173660 abstract "The mimosoid legumes are a clade of ~40 genera in the Caesalpinioideae subfamily of the Fabaceae that grow in tropical and subtropical regions. Unlike the better studied Papilionoideae, there are few genomic resources within this legume group. The tree Prosopis cineraria is native to the Near East and Indian subcontinent, where it thrives in very hot desert environments. To develop a tool to better understand desert plant adaptation mechanisms, we sequenced the P. cineraria genome to near-chromosomal assembly, with a total sequence length of ~691 Mb. We predicted 77,579 gene models (76,554 CDS, 361 rRNAs and 664 tRNAs) from the assembled genome, among them 55,325 (~72%) protein-coding genes that were functionally annotated. This genome was found to consist of over 58% repeat sequences, primarily long terminal repeats (LTR-)-retrotransposons. We find an expansion of terpenoid metabolism genes in P. cineraria and its relative Prosopis alba, but not in other legumes. We also observed an amplification of NBS-LRR disease-resistance genes correlated with LTR-associated retrotransposition, and identified 410 retrogenes with an active burst of chimeric retrogene creation that approximately occurred at the same time of divergence of P. cineraria from a common lineage with P. alba~23 Mya. These retrogenes include many biotic defense responses and abiotic stress stimulus responses, as well as the early Nodulin 93 gene. Nodulin 93 gene amplification is consistent with an adaptive response of the species to the low nitrogen in arid desert soil. Consistent with these results, our differentially expressed genes show a tissue specific expression of isoprenoid pathways in shoots, but not in roots, as well as important genes involved in abiotic salt stress in both tissues. Overall, the genome sequence of P. cineraria enriches our understanding of the genomic mechanisms of its disease resistance and abiotic stress tolerance. Thus, it is a very important step in crop and legume improvement." @default.
• W4289173660 created "2022-08-01" @default.
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• W4289173660 date "2022-07-31" @default.
• W4289173660 modified "2023-10-16" @default.
• W4289173660 title "The Genome of the Mimosoid Legume Prosopis cineraria, a Desert Tree" @default.
• W4289173660 cites W1035512110 @default.
• W4289173660 cites W108684213 @default.
• W4289173660 cites W1484347389 @default.
• W4289173660 cites W1489349053 @default.
• W4289173660 cites W1494284268 @default.
• W4289173660 cites W1546656845 @default.
• W4289173660 cites W1771477172 @default.
• W4289173660 cites W1965565026 @default.
• W4289173660 cites W1969353942 @default.
• W4289173660 cites W1973408460 @default.
• W4289173660 cites W1980712283 @default.
• W4289173660 cites W1982855075 @default.
• W4289173660 cites W1994829204 @default.
• W4289173660 cites W1996700726 @default.
• W4289173660 cites W2002060857 @default.
• W4289173660 cites W2010012072 @default.
• W4289173660 cites W2012453697 @default.
• W4289173660 cites W2012986985 @default.
• W4289173660 cites W2013469333 @default.
• W4289173660 cites W2029420003 @default.
• W4289173660 cites W2038546569 @default.
• W4289173660 cites W2045843097 @default.
• W4289173660 cites W2047957449 @default.
• W4289173660 cites W2049131915 @default.
• W4289173660 cites W2054254276 @default.
• W4289173660 cites W2059805279 @default.
• W4289173660 cites W2064911343 @default.
• W4289173660 cites W2087288699 @default.
• W4289173660 cites W2089218390 @default.
• W4289173660 cites W2090146405 @default.
• W4289173660 cites W2092686336 @default.
• W4289173660 cites W2094334461 @default.
• W4289173660 cites W2096086497 @default.
• W4289173660 cites W2098642031 @default.
• W4289173660 cites W2103441770 @default.
• W4289173660 cites W2104005232 @default.
• W4289173660 cites W2106870860 @default.
• W4289173660 cites W2108108770 @default.
• W4289173660 cites W2108234281 @default.
• W4289173660 cites W2110553548 @default.
• W4289173660 cites W2111306132 @default.
• W4289173660 cites W2111392141 @default.
• W4289173660 cites W2113357192 @default.
• W4289173660 cites W2113865666 @default.
• W4289173660 cites W2116423958 @default.
• W4289173660 cites W2117575205 @default.
• W4289173660 cites W2122158321 @default.
• W4289173660 cites W2125360702 @default.
• W4289173660 cites W2128605601 @default.
• W4289173660 cites W2131271579 @default.
• W4289173660 cites W2133579817 @default.
• W4289173660 cites W2136090457 @default.
• W4289173660 cites W2138694888 @default.
• W4289173660 cites W2139440257 @default.
• W4289173660 cites W2141885858 @default.
• W4289173660 cites W2148565060 @default.
• W4289173660 cites W2149757797 @default.
• W4289173660 cites W2149902435 @default.
• W4289173660 cites W2153053778 @default.
• W4289173660 cites W2156119794 @default.
• W4289173660 cites W2156375898 @default.
• W4289173660 cites W2158804744 @default.
• W4289173660 cites W2159038577 @default.
• W4289173660 cites W2159368494 @default.
• W4289173660 cites W2159482845 @default.
• W4289173660 cites W2159770366 @default.
• W4289173660 cites W2161062388 @default.
• W4289173660 cites W2179438025 @default.
• W4289173660 cites W2188547234 @default.
• W4289173660 cites W2507351419 @default.
• W4289173660 cites W2510875395 @default.
• W4289173660 cites W2766258845 @default.
• W4289173660 cites W2772231999 @default.
• W4289173660 cites W2893685218 @default.
• W4289173660 cites W2913612422 @default.
• W4289173660 cites W2941072767 @default.
• W4289173660 cites W2941342985 @default.

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