Matches in SemOpenAlex for { <https://semopenalex.org/work/W4315705040> ?p ?o ?g. }
Showing items 1 to 91 of
91
with 100 items per page.
- W4315705040 endingPage "409" @default.
- W4315705040 startingPage "409" @default.
- W4315705040 abstract "<ns4:p>In the era of Big Data, data collection underpins biological research more than ever before. In many cases, this can be as time-consuming as the analysis itself. It requires downloading multiple public databases with various data structures, and in general, spending days preparing the data before answering any biological questions. Here, we introduce Sherlock, an open-source, cloud-based big data platform (<ns4:ext-link xmlns:ns5=http://www.w3.org/1999/xlink ext-link-type=uri ns5:href=https://earlham-sherlock.github.io/>https://earlham-sherlock.github.io/</ns4:ext-link>) to solve this problem. Sherlock provides a gap-filling way for computational biologists to store, convert, query, share and generate biology data while ultimately streamlining bioinformatics data management.<ns4:bold> </ns4:bold>The<ns4:bold> </ns4:bold>Sherlock platform offers a simple interface to leverage big data technologies, such as Docker and PrestoDB. Sherlock is designed to enable users to analyze, process, query and extract information from extremely complex and large data sets. Furthermore, Sherlock can handle different structured data (interaction, localization, or genomic sequence) from several sources and convert them to a common optimized storage format, for example, the Optimized Row Columnar (ORC). This format facilitates Sherlock’s ability to quickly and efficiently execute distributed analytical queries on extremely large data files and share datasets between teams.<ns4:bold> </ns4:bold>The Sherlock platform is freely available on GitHub, and contains specific loader scripts for structured data sources of genomics, interaction and expression databases. With these loader scripts, users can easily and quickly create and work with specific file formats, such as JavaScript Object Notation (JSON) or ORC. For computational biology and large-scale bioinformatics projects, Sherlock provides an open-source platform empowering data management, analytics, integration and collaboration through modern big data technologies.</ns4:p>" @default.
- W4315705040 created "2023-01-12" @default.
- W4315705040 creator A5011254713 @default.
- W4315705040 creator A5011513198 @default.
- W4315705040 creator A5012703372 @default.
- W4315705040 creator A5015157681 @default.
- W4315705040 creator A5027550466 @default.
- W4315705040 creator A5037926026 @default.
- W4315705040 creator A5039104079 @default.
- W4315705040 date "2023-01-12" @default.
- W4315705040 modified "2023-10-15" @default.
- W4315705040 title "Sherlock: an open-source data platform to store, analyze and integrate Big Data for computational biologists" @default.
- W4315705040 cites W2043764521 @default.
- W4315705040 cites W2081930221 @default.
- W4315705040 cites W2092123736 @default.
- W4315705040 cites W2100428244 @default.
- W4315705040 cites W2103017472 @default.
- W4315705040 cites W2116034137 @default.
- W4315705040 cites W2117513900 @default.
- W4315705040 cites W2140883620 @default.
- W4315705040 cites W2173213060 @default.
- W4315705040 cites W2239787172 @default.
- W4315705040 cites W2557682445 @default.
- W4315705040 cites W2558534012 @default.
- W4315705040 cites W2772692099 @default.
- W4315705040 cites W2785444232 @default.
- W4315705040 cites W2900569176 @default.
- W4315705040 cites W3015964336 @default.
- W4315705040 cites W3091866222 @default.
- W4315705040 cites W3112376646 @default.
- W4315705040 cites W3138055079 @default.
- W4315705040 cites W3211600587 @default.
- W4315705040 doi "https://doi.org/10.12688/f1000research.52791.3" @default.
- W4315705040 hasPublicationYear "2023" @default.
- W4315705040 type Work @default.
- W4315705040 citedByCount "0" @default.
- W4315705040 crossrefType "journal-article" @default.
- W4315705040 hasAuthorship W4315705040A5011254713 @default.
- W4315705040 hasAuthorship W4315705040A5011513198 @default.
- W4315705040 hasAuthorship W4315705040A5012703372 @default.
- W4315705040 hasAuthorship W4315705040A5015157681 @default.
- W4315705040 hasAuthorship W4315705040A5027550466 @default.
- W4315705040 hasAuthorship W4315705040A5037926026 @default.
- W4315705040 hasAuthorship W4315705040A5039104079 @default.
- W4315705040 hasBestOaLocation W43157050401 @default.
- W4315705040 hasConcept C111919701 @default.
- W4315705040 hasConcept C124101348 @default.
- W4315705040 hasConcept C136764020 @default.
- W4315705040 hasConcept C138958017 @default.
- W4315705040 hasConcept C153083717 @default.
- W4315705040 hasConcept C154945302 @default.
- W4315705040 hasConcept C2522767166 @default.
- W4315705040 hasConcept C41008148 @default.
- W4315705040 hasConcept C61423126 @default.
- W4315705040 hasConcept C71901391 @default.
- W4315705040 hasConcept C75684735 @default.
- W4315705040 hasConcept C77088390 @default.
- W4315705040 hasConceptScore W4315705040C111919701 @default.
- W4315705040 hasConceptScore W4315705040C124101348 @default.
- W4315705040 hasConceptScore W4315705040C136764020 @default.
- W4315705040 hasConceptScore W4315705040C138958017 @default.
- W4315705040 hasConceptScore W4315705040C153083717 @default.
- W4315705040 hasConceptScore W4315705040C154945302 @default.
- W4315705040 hasConceptScore W4315705040C2522767166 @default.
- W4315705040 hasConceptScore W4315705040C41008148 @default.
- W4315705040 hasConceptScore W4315705040C61423126 @default.
- W4315705040 hasConceptScore W4315705040C71901391 @default.
- W4315705040 hasConceptScore W4315705040C75684735 @default.
- W4315705040 hasConceptScore W4315705040C77088390 @default.
- W4315705040 hasFunder F4320325694 @default.
- W4315705040 hasFunder F4320334629 @default.
- W4315705040 hasLocation W43157050401 @default.
- W4315705040 hasLocation W43157050402 @default.
- W4315705040 hasOpenAccess W4315705040 @default.
- W4315705040 hasPrimaryLocation W43157050401 @default.
- W4315705040 hasRelatedWork W198623210 @default.
- W4315705040 hasRelatedWork W2079488264 @default.
- W4315705040 hasRelatedWork W2523667109 @default.
- W4315705040 hasRelatedWork W2548527558 @default.
- W4315705040 hasRelatedWork W2575072784 @default.
- W4315705040 hasRelatedWork W2913152377 @default.
- W4315705040 hasRelatedWork W2989402836 @default.
- W4315705040 hasRelatedWork W3213207708 @default.
- W4315705040 hasRelatedWork W4225687343 @default.
- W4315705040 hasRelatedWork W601931663 @default.
- W4315705040 hasVolume "10" @default.
- W4315705040 isParatext "false" @default.
- W4315705040 isRetracted "false" @default.
- W4315705040 workType "article" @default.