FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4361006843> ?p ?o ?g. }

• W4361006843 endingPage "1505" @default.
• W4361006843 startingPage "1490" @default.
• W4361006843 abstract "SUMMARY Australian pine ( Casuarina spp.) is extensively planted in tropical and subtropical regions for wood production, shelterbelts, environmental protection, and ecological restoration due to their superior biological characteristics, such as rapid growth, wind and salt tolerance, and nitrogen fixation. To analyze the genomic diversity of Casuarina , we sequenced the genomes and constructed de novo genome assemblies of the three most widely planted Casuarina species: C. equisetifolia , C. glauca , and C. cunninghamiana . We generated chromosome‐scale genome sequences using both Pacific Biosciences (PacBio) Sequel sequencing and chromosome conformation capture technology (Hi‐C). The total genome sizes for C. equisetifolia , C. glauca , and C. cunninghamiana are 268 942 579 bp, 296 631 783 bp, and 293 483 606 bp, respectively, of which 25.91, 27.15, and 27.74% were annotated as repetitive sequences. We annotated 23 162, 24 673, and 24 674 protein‐coding genes in C. equisetifolia , C. glauca , and C. cunninghamiana , respectively. We then collected branchlets from male and female individuals for whole‐genome bisulfite sequencing (BS‐seq) to explore the epigenetic regulation of sex determination in these three species. Transcriptome sequencing (RNA‐seq) revealed differential expression of phytohormone‐related genes between male and female plants. In summary, we generated three chromosome‐level genome assemblies and comprehensive DNA methylation and transcriptome datasets from both male and female material for three Casuarina species, providing a basis for the comprehensive investigation of genomic diversity and functional gene discovery of Casuarina in the future." @default.
• W4361006843 created "2023-03-30" @default.
• W4361006843 creator A5011318625 @default.
• W4361006843 creator A5013855838 @default.
• W4361006843 creator A5017467042 @default.
• W4361006843 creator A5025768990 @default.
• W4361006843 creator A5046434677 @default.
• W4361006843 creator A5053950502 @default.
• W4361006843 creator A5054423424 @default.
• W4361006843 creator A5061085951 @default.
• W4361006843 creator A5062158926 @default.
• W4361006843 creator A5064222660 @default.
• W4361006843 creator A5069367362 @default.
• W4361006843 creator A5073439482 @default.
• W4361006843 creator A5079962049 @default.
• W4361006843 creator A5081211945 @default.
• W4361006843 date "2023-04-06" @default.
• W4361006843 modified "2023-10-12" @default.
• W4361006843 title "Chromosome‐scale <i>de novo</i> genome assembly and annotation of three representative <i>Casuarina</i> species: <i>C. equisetifolia</i>, <i>C. glauca</i>, and <i>C. cunninghamiana</i>" @default.
• W4361006843 cites W1580711180 @default.
• W4361006843 cites W1883320007 @default.
• W4361006843 cites W1982742435 @default.
• W4361006843 cites W1982855075 @default.
• W4361006843 cites W1985653866 @default.
• W4361006843 cites W2006266035 @default.
• W4361006843 cites W2011647579 @default.
• W4361006843 cites W2017760495 @default.
• W4361006843 cites W2020774943 @default.
• W4361006843 cites W2022474729 @default.
• W4361006843 cites W2032451685 @default.
• W4361006843 cites W2034978075 @default.
• W4361006843 cites W2035618305 @default.
• W4361006843 cites W2044885732 @default.
• W4361006843 cites W2049501120 @default.
• W4361006843 cites W2050677103 @default.
• W4361006843 cites W2053997134 @default.
• W4361006843 cites W2060136365 @default.
• W4361006843 cites W2062836337 @default.
• W4361006843 cites W2065877013 @default.
• W4361006843 cites W2083185088 @default.
• W4361006843 cites W2083197595 @default.
• W4361006843 cites W2090037139 @default.
• W4361006843 cites W2099073133 @default.
• W4361006843 cites W2099505471 @default.
• W4361006843 cites W2100305481 @default.
• W4361006843 cites W2103441770 @default.
• W4361006843 cites W2104005232 @default.
• W4361006843 cites W2106208020 @default.
• W4361006843 cites W2113636307 @default.
• W4361006843 cites W2114104545 @default.
• W4361006843 cites W2115159088 @default.
• W4361006843 cites W2129475334 @default.
• W4361006843 cites W2131374955 @default.
• W4361006843 cites W2138207763 @default.
• W4361006843 cites W2140472932 @default.
• W4361006843 cites W2152605077 @default.
• W4361006843 cites W2154431984 @default.
• W4361006843 cites W2160054561 @default.
• W4361006843 cites W2160177274 @default.
• W4361006843 cites W2164154943 @default.
• W4361006843 cites W2168292723 @default.
• W4361006843 cites W2170674267 @default.
• W4361006843 cites W2281736862 @default.
• W4361006843 cites W2319184719 @default.
• W4361006843 cites W2325389630 @default.
• W4361006843 cites W2396077153 @default.
• W4361006843 cites W2481029670 @default.
• W4361006843 cites W2509862598 @default.
• W4361006843 cites W2538143681 @default.
• W4361006843 cites W2562709979 @default.
• W4361006843 cites W2753324335 @default.
• W4361006843 cites W2789843538 @default.
• W4361006843 cites W2792574422 @default.
• W4361006843 cites W2796073363 @default.
• W4361006843 cites W2811129245 @default.
• W4361006843 cites W2892148950 @default.
• W4361006843 cites W2901134781 @default.
• W4361006843 cites W2903125175 @default.
• W4361006843 cites W2949086752 @default.
• W4361006843 cites W2964849163 @default.
• W4361006843 cites W2977754239 @default.
• W4361006843 cites W2994632914 @default.
• W4361006843 cites W3016029250 @default.
• W4361006843 cites W3180961869 @default.
• W4361006843 cites W3183295545 @default.
• W4361006843 cites W3196627309 @default.
• W4361006843 cites W3199279100 @default.
• W4361006843 cites W4234394369 @default.
• W4361006843 cites W4243890786 @default.
• W4361006843 cites W4283829280 @default.
• W4361006843 cites W746807024 @default.
• W4361006843 doi "https://doi.org/10.1111/tpj.16201" @default.
• W4361006843 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/36971060" @default.
• W4361006843 hasPublicationYear "2023" @default.
• W4361006843 type Work @default.
• W4361006843 citedByCount "1" @default.
• W4361006843 countsByYear W43610068432023 @default.
• W4361006843 crossrefType "journal-article" @default.

• next