Matches in SemOpenAlex for { <https://semopenalex.org/work/W4376954966> ?p ?o ?g. }
- W4376954966 endingPage "101044" @default.
- W4376954966 startingPage "101044" @default.
- W4376954966 abstract "Haliotis midae or “perlemoen” is one of five abalone species endemic to South Africa, and being palatable, the only commercially important abalone species with a high international demand. The higher demand for this abalone species has resulted in the decrease of natural stocks due to overexploitation by capture fisheries and poaching. Facilitating aquaculture production of H. midae should assist in minimising the pressure on the wild populations. Here, the draft genome of H. midae has been sequenced, assembled, and annotated. The draft assembly resulted in a total length of 1.5 Gb, contig N50 of 0.238 Mb, scaffold N50 of 0. 238 Mb and GC level of 40%. Gene annotation, combining ab initio and evidence-based pipelines identified 52,280 genes with protein coding potential. The genes identified were used to predict orthologous genes shared among the four other abalone species (H. laevigata, H. rubra, H. discus hannai and H. rufescens) and 4702 orthologous genes were shared across the five species. Among the orthologous genes in abalones, single copy genes were further analysed for signatures of selection and several molecular regulatory proteins involved in developmental functions were found to be under positive selection in specific abalone lineages. Furthermore, whole genome SNP-based phylogenomic assessment was performed to confirm the evolutionary relationship among the considered abalone species with draft genomes, reaffirming that H. midae is closely related to the Australian Greenlip (H. laevigata) and Blacklip (H. rubra). The study assists in the understanding of genes related to various biological systems underscoring the evolution and development of abalones, with potential applications for genetic improvement of commercial stocks." @default.
- W4376954966 created "2023-05-18" @default.
- W4376954966 creator A5044917208 @default.
- W4376954966 creator A5072356491 @default.
- W4376954966 creator A5091912311 @default.
- W4376954966 date "2023-08-01" @default.
- W4376954966 modified "2023-09-29" @default.
- W4376954966 title "A first annotated genome sequence for Haliotis midae with genomic insights into abalone evolution and traits of economic importance" @default.
- W4376954966 cites W1677136551 @default.
- W4376954966 cites W1894704618 @default.
- W4376954966 cites W1974245393 @default.
- W4376954966 cites W1980195730 @default.
- W4376954966 cites W1980866054 @default.
- W4376954966 cites W1990645521 @default.
- W4376954966 cites W1996385176 @default.
- W4376954966 cites W1996700726 @default.
- W4376954966 cites W2013828316 @default.
- W4376954966 cites W2018507889 @default.
- W4376954966 cites W2020483939 @default.
- W4376954966 cites W2025034827 @default.
- W4376954966 cites W2027680469 @default.
- W4376954966 cites W2033826996 @default.
- W4376954966 cites W2047628240 @default.
- W4376954966 cites W2047815153 @default.
- W4376954966 cites W2049041198 @default.
- W4376954966 cites W2058354814 @default.
- W4376954966 cites W2062236243 @default.
- W4376954966 cites W2063046618 @default.
- W4376954966 cites W2076079755 @default.
- W4376954966 cites W2077750327 @default.
- W4376954966 cites W2092288448 @default.
- W4376954966 cites W2099753867 @default.
- W4376954966 cites W2101504489 @default.
- W4376954966 cites W2108234281 @default.
- W4376954966 cites W2109346394 @default.
- W4376954966 cites W2110155683 @default.
- W4376954966 cites W2110335151 @default.
- W4376954966 cites W2111211467 @default.
- W4376954966 cites W2112814753 @default.
- W4376954966 cites W2121104417 @default.
- W4376954966 cites W2123516016 @default.
- W4376954966 cites W2124676809 @default.
- W4376954966 cites W2126150933 @default.
- W4376954966 cites W2126459657 @default.
- W4376954966 cites W2126713416 @default.
- W4376954966 cites W2127403198 @default.
- W4376954966 cites W2128291510 @default.
- W4376954966 cites W2128401714 @default.
- W4376954966 cites W2129744420 @default.
- W4376954966 cites W2130187381 @default.
- W4376954966 cites W2132926880 @default.
- W4376954966 cites W2133709795 @default.
- W4376954966 cites W2134526193 @default.
- W4376954966 cites W2141052558 @default.
- W4376954966 cites W2141637710 @default.
- W4376954966 cites W2142678478 @default.
- W4376954966 cites W2144268209 @default.
- W4376954966 cites W2148853951 @default.
- W4376954966 cites W2149992227 @default.
- W4376954966 cites W2150131459 @default.
- W4376954966 cites W2151899848 @default.
- W4376954966 cites W2159038577 @default.
- W4376954966 cites W2159597641 @default.
- W4376954966 cites W2162514434 @default.
- W4376954966 cites W2165870648 @default.
- W4376954966 cites W2173500490 @default.
- W4376954966 cites W2204473392 @default.
- W4376954966 cites W2256261253 @default.
- W4376954966 cites W2478069441 @default.
- W4376954966 cites W2513148071 @default.
- W4376954966 cites W2513968524 @default.
- W4376954966 cites W2530072817 @default.
- W4376954966 cites W2547716557 @default.
- W4376954966 cites W2559186674 @default.
- W4376954966 cites W2575750030 @default.
- W4376954966 cites W2593651120 @default.
- W4376954966 cites W2769673674 @default.
- W4376954966 cites W2788228074 @default.
- W4376954966 cites W2802932755 @default.
- W4376954966 cites W2903371628 @default.
- W4376954966 cites W2904798570 @default.
- W4376954966 cites W2910233601 @default.
- W4376954966 cites W2941629467 @default.
- W4376954966 cites W2949335099 @default.
- W4376954966 cites W2951912016 @default.
- W4376954966 cites W2953078967 @default.
- W4376954966 cites W2969663628 @default.
- W4376954966 cites W2988396470 @default.
- W4376954966 cites W2998027614 @default.
- W4376954966 cites W2999178667 @default.
- W4376954966 cites W3081109178 @default.
- W4376954966 cites W3085758516 @default.
- W4376954966 cites W3107895757 @default.
- W4376954966 cites W3127081699 @default.
- W4376954966 cites W3158798290 @default.
- W4376954966 cites W3186309583 @default.
- W4376954966 cites W3196604732 @default.
- W4376954966 cites W3196650100 @default.