FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4377091041> ?p ?o ?g. }

• W4377091041 endingPage "22" @default.
• W4377091041 startingPage "1" @default.
• W4377091041 abstract "Reference ontologies provide a shared vocabulary and knowledge resource for their domain. Manual construction and annotation enables them to maintain high quality, allowing them to be widely accepted across their community. However, the manual ontology development process does not scale for large domains. We present a new methodology for automatic ontology extension for domains in which the ontology classes have associated graph-structured annotations, and apply it to the ChEBI ontology, a prominent reference ontology for life sciences chemistry. We train Transformer-based deep learning models on the leaf node structures from the ChEBI ontology and the classes to which they belong. The models are then able to automatically classify previously unseen chemical structures, resulting in automated ontology extension. The proposed models achieved an overall F1 scores of 0.80 and above, improvements of at least 6 percentage points over our previous results on the same dataset. In addition, the models are interpretable: we illustrate that visualizing the model’s attention weights can help to explain the results by providing insight into how the model made its decisions. We also analyse the performance for molecules that have not been part of the ontology and evaluate the logical correctness of the resulting extension." @default.
• W4377091041 created "2023-05-20" @default.
• W4377091041 creator A5040001719 @default.
• W4377091041 creator A5044072805 @default.
• W4377091041 creator A5071777525 @default.
• W4377091041 creator A5080272127 @default.
• W4377091041 creator A5084910607 @default.
• W4377091041 date "2023-05-18" @default.
• W4377091041 modified "2023-10-01" @default.
• W4377091041 title "Interpretable ontology extension in chemistry" @default.
• W4377091041 cites W1852306145 @default.
• W4377091041 cites W1908162016 @default.
• W4377091041 cites W1935434993 @default.
• W4377091041 cites W1965091013 @default.
• W4377091041 cites W1980352552 @default.
• W4377091041 cites W1987149482 @default.
• W4377091041 cites W1990442426 @default.
• W4377091041 cites W2001869885 @default.
• W4377091041 cites W2098173334 @default.
• W4377091041 cites W2113142309 @default.
• W4377091041 cites W2114940395 @default.
• W4377091041 cites W2116341502 @default.
• W4377091041 cites W2120564292 @default.
• W4377091041 cites W2127553917 @default.
• W4377091041 cites W2143916531 @default.
• W4377091041 cites W2157058953 @default.
• W4377091041 cites W2294320291 @default.
• W4377091041 cites W2396132865 @default.
• W4377091041 cites W2517788860 @default.
• W4377091041 cites W2548357532 @default.
• W4377091041 cites W2594183968 @default.
• W4377091041 cites W2769423117 @default.
• W4377091041 cites W2793281803 @default.
• W4377091041 cites W2900549448 @default.
• W4377091041 cites W2950128007 @default.
• W4377091041 cites W2963847595 @default.
• W4377091041 cites W2990351990 @default.
• W4377091041 cites W2999954485 @default.
• W4377091041 cites W3108604517 @default.
• W4377091041 cites W3120715532 @default.
• W4377091041 cites W3138781613 @default.
• W4377091041 cites W3143081747 @default.
• W4377091041 cites W3159515793 @default.
• W4377091041 cites W4238781491 @default.
• W4377091041 cites W4293690910 @default.
• W4377091041 cites W74015016 @default.
• W4377091041 doi "https://doi.org/10.3233/sw-233183" @default.
• W4377091041 hasPublicationYear "2023" @default.
• W4377091041 type Work @default.
• W4377091041 citedByCount "0" @default.
• W4377091041 crossrefType "journal-article" @default.
• W4377091041 hasAuthorship W4377091041A5040001719 @default.
• W4377091041 hasAuthorship W4377091041A5044072805 @default.
• W4377091041 hasAuthorship W4377091041A5071777525 @default.
• W4377091041 hasAuthorship W4377091041A5080272127 @default.
• W4377091041 hasAuthorship W4377091041A5084910607 @default.
• W4377091041 hasBestOaLocation W43770910411 @default.
• W4377091041 hasConcept C111472728 @default.
• W4377091041 hasConcept C137003198 @default.
• W4377091041 hasConcept C137982476 @default.
• W4377091041 hasConcept C138885662 @default.
• W4377091041 hasConcept C154210476 @default.
• W4377091041 hasConcept C154945302 @default.
• W4377091041 hasConcept C199360897 @default.
• W4377091041 hasConcept C204321447 @default.
• W4377091041 hasConcept C2129575 @default.
• W4377091041 hasConcept C22550185 @default.
• W4377091041 hasConcept C23123220 @default.
• W4377091041 hasConcept C25810664 @default.
• W4377091041 hasConcept C2776321320 @default.
• W4377091041 hasConcept C2777002027 @default.
• W4377091041 hasConcept C2777601683 @default.
• W4377091041 hasConcept C2778820784 @default.
• W4377091041 hasConcept C41008148 @default.
• W4377091041 hasConcept C41895202 @default.
• W4377091041 hasConcept C50971890 @default.
• W4377091041 hasConcept C55439883 @default.
• W4377091041 hasConcept C78726541 @default.
• W4377091041 hasConcept C98893333 @default.
• W4377091041 hasConceptScore W4377091041C111472728 @default.
• W4377091041 hasConceptScore W4377091041C137003198 @default.
• W4377091041 hasConceptScore W4377091041C137982476 @default.
• W4377091041 hasConceptScore W4377091041C138885662 @default.
• W4377091041 hasConceptScore W4377091041C154210476 @default.
• W4377091041 hasConceptScore W4377091041C154945302 @default.
• W4377091041 hasConceptScore W4377091041C199360897 @default.
• W4377091041 hasConceptScore W4377091041C204321447 @default.
• W4377091041 hasConceptScore W4377091041C2129575 @default.
• W4377091041 hasConceptScore W4377091041C22550185 @default.
• W4377091041 hasConceptScore W4377091041C23123220 @default.
• W4377091041 hasConceptScore W4377091041C25810664 @default.
• W4377091041 hasConceptScore W4377091041C2776321320 @default.
• W4377091041 hasConceptScore W4377091041C2777002027 @default.
• W4377091041 hasConceptScore W4377091041C2777601683 @default.
• W4377091041 hasConceptScore W4377091041C2778820784 @default.
• W4377091041 hasConceptScore W4377091041C41008148 @default.
• W4377091041 hasConceptScore W4377091041C41895202 @default.
• W4377091041 hasConceptScore W4377091041C50971890 @default.

• next