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- W4377220850 endingPage "586" @default.
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- W4377220850 abstract "Leucine-rich repeats (LRRs) occurring in tandem are 20-29 amino acids long. Eleven LRR types have been recognized; they include plant-specific (PS) type with the consensus of LxxLxLxxNxL SGxIPxxIxxLxx of 24 residues and SDS22-like type with the consensus of LxxLxLxxNxL xxIxxIxxLxx of 22 residues.A viral LRR protein in metagenome data indicated that most of the LRRs (5/6 = 0.83) are represented by the consensus of LxxLDLxxTxV SGKLSDLxxLTN of 23 residues. This LRR shows a dual characteristic of PS and SDS22-like LRRs (called PS/SDS22-like LRR). A comprehensive similarity search was performed under the hypothesis that many proteins contain LRR domains consisting of only or mainly PS/SDS22-like LRR.Sequence similarity search by the FASTA and BLAST programs was performed using the sequence of this PS/SDS22-like LRR domain as a query sequence. The presence of PS/SDS22-like LRR was screened within the LRR domains in known structures.Over 280 LRR proteins were identified from protists, fungi, and bacteria; ~ 40% come from the SAR group (the phyla Alveolate and Stramenopiles). The secondary structure analysis of PS/SDS22-like LRRs occurring sporadically in the known structures indicates three or four type patterns of secondary structures.PS/SDS22-like LRR forms an LRR class with PS, SDS22-like and Leptospira-like LRRs. It appears that PS/SDS22-like LRR is a chameleon-like sequence. A duality of two LRR types brings diversity." @default.
- W4377220850 created "2023-05-23" @default.
- W4377220850 creator A5018729113 @default.
- W4377220850 creator A5035694899 @default.
- W4377220850 creator A5036256543 @default.
- W4377220850 creator A5045585526 @default.
- W4377220850 date "2023-07-01" @default.
- W4377220850 modified "2023-09-27" @default.
- W4377220850 title "A Dual Leucine-rich Repeat in Proteins from the Eukaryotic SAR Group" @default.
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- W4377220850 doi "https://doi.org/10.2174/0929866530666230519160439" @default.
- W4377220850 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/37211850" @default.
- W4377220850 hasPublicationYear "2023" @default.
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