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• W4379805272 endingPage "e0286324" @default.
• W4379805272 startingPage "e0286324" @default.
• W4379805272 abstract "Plant growth and development can be influenced by cold stress. Responses of plants to cold are regulated in part by transcription factors (TFs) and microRNAs, which their determination would be necessary in comprehension of the corresponding molecular cues. Here, transcriptomes of Arabidopsis and rice were analyzed to computationally determine TFs and microRNAs that are differentially responsive to cold treatment, and their co-expression networks were established. Among 181 Arabidopsis and 168 rice differentially expressed TF genes, 37 (26 novel) were up- and 16 (8 novel) were downregulated. Common TF encoding genes were from ERF, MYB, bHLH, NFY, bZIP, GATA, HSF and WRKY families. NFY A4/C2/A10 were the significant hub TFs in both plants. Phytohormone responsive cis-elements such as ABRE, TGA, TCA and LTR were the common cis-elements in TF promoters. Arabidopsis had more responsive TFs compared to rice possibly due to its greater adaptation to ranges geographical latitudes. Rice had more relevant miRNAs probably because of its bigger genome size. The interacting partners and co-expressed genes were different for the common TFs so that of the downstream regulatory networks and the corresponding metabolic pathways. Identified cold-responsive TFs in (A + R) seemed to be more engaged in energy metabolism esp. photosynthesis, and signal transduction, respectively. At post-transcriptional level, miR5075 showed to target many identified TFs in rice. In comparison, the predictions showed that identified TFs are being targeted by diverse groups of miRNAs in Arabidopsis. Novel TFs, miRNAs and co-expressed genes were introduced as cold-responsive markers that can be harnessed in future studies and development of crop tolerant varieties." @default.
• W4379805272 created "2023-06-09" @default.
• W4379805272 creator A5049851386 @default.
• W4379805272 creator A5052473814 @default.
• W4379805272 creator A5082692424 @default.
• W4379805272 date "2023-06-08" @default.
• W4379805272 modified "2023-10-18" @default.
• W4379805272 title "Cold-responsive transcription factors in Arabidopsis and rice: A regulatory network analysis using array data and gene co-expression network" @default.
• W4379805272 cites W1524821294 @default.
• W4379805272 cites W1673783778 @default.
• W4379805272 cites W1709815505 @default.
• W4379805272 cites W1840161315 @default.
• W4379805272 cites W1901168035 @default.
• W4379805272 cites W1967578487 @default.
• W4379805272 cites W1978821137 @default.
• W4379805272 cites W1985600167 @default.
• W4379805272 cites W1997038372 @default.
• W4379805272 cites W2003290833 @default.
• W4379805272 cites W2024153389 @default.
• W4379805272 cites W2030909328 @default.
• W4379805272 cites W2031879512 @default.
• W4379805272 cites W2035908878 @default.
• W4379805272 cites W2040811909 @default.
• W4379805272 cites W2040926513 @default.
• W4379805272 cites W2045299822 @default.
• W4379805272 cites W2057533559 @default.
• W4379805272 cites W2060724738 @default.
• W4379805272 cites W2062203098 @default.
• W4379805272 cites W2067383665 @default.
• W4379805272 cites W2074300177 @default.
• W4379805272 cites W2083560029 @default.
• W4379805272 cites W2083860265 @default.
• W4379805272 cites W2094253263 @default.
• W4379805272 cites W2098007670 @default.
• W4379805272 cites W2098222328 @default.
• W4379805272 cites W2103912979 @default.
• W4379805272 cites W2105893345 @default.
• W4379805272 cites W2112351234 @default.
• W4379805272 cites W2119761330 @default.
• W4379805272 cites W2120470126 @default.
• W4379805272 cites W2121366990 @default.
• W4379805272 cites W2127968944 @default.
• W4379805272 cites W2130472562 @default.
• W4379805272 cites W2135212876 @default.
• W4379805272 cites W2137781301 @default.
• W4379805272 cites W2138098955 @default.
• W4379805272 cites W2140046045 @default.
• W4379805272 cites W2147838931 @default.
• W4379805272 cites W2149996760 @default.
• W4379805272 cites W2151115617 @default.
• W4379805272 cites W2152871523 @default.
• W4379805272 cites W2159482845 @default.
• W4379805272 cites W2159675211 @default.
• W4379805272 cites W2160069833 @default.
• W4379805272 cites W2160479334 @default.
• W4379805272 cites W2168023061 @default.
• W4379805272 cites W2170561036 @default.
• W4379805272 cites W2230402600 @default.
• W4379805272 cites W2262887429 @default.
• W4379805272 cites W2270311301 @default.
• W4379805272 cites W2321377084 @default.
• W4379805272 cites W2506029639 @default.
• W4379805272 cites W2537623931 @default.
• W4379805272 cites W2538134446 @default.
• W4379805272 cites W2571128374 @default.
• W4379805272 cites W2594112212 @default.
• W4379805272 cites W2605090810 @default.
• W4379805272 cites W2607170507 @default.
• W4379805272 cites W2611788492 @default.
• W4379805272 cites W2707932416 @default.
• W4379805272 cites W2758727546 @default.
• W4379805272 cites W2761284713 @default.
• W4379805272 cites W2763135818 @default.
• W4379805272 cites W2775315818 @default.
• W4379805272 cites W2776449119 @default.
• W4379805272 cites W2778443091 @default.
• W4379805272 cites W2792556174 @default.
• W4379805272 cites W2800206218 @default.
• W4379805272 cites W2883695687 @default.
• W4379805272 cites W2887017180 @default.
• W4379805272 cites W2892159773 @default.
• W4379805272 cites W2899798266 @default.
• W4379805272 cites W2901311844 @default.
• W4379805272 cites W2902449171 @default.
• W4379805272 cites W2903432206 @default.
• W4379805272 cites W2914482281 @default.
• W4379805272 cites W2914597028 @default.
• W4379805272 cites W2917101543 @default.
• W4379805272 cites W2945725729 @default.
• W4379805272 cites W2977346297 @default.
• W4379805272 cites W2979467619 @default.
• W4379805272 cites W3000008836 @default.
• W4379805272 cites W3004639169 @default.
• W4379805272 cites W3042276018 @default.
• W4379805272 cites W3095587678 @default.
• W4379805272 cites W3118484049 @default.
• W4379805272 cites W3129575117 @default.
• W4379805272 cites W3136500495 @default.

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