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- W4380877453 startingPage "1273" @default.
- W4380877453 abstract "WD40 proteins are a superfamily of regulatory proteins widely found in eukaryotes that play an important role in regulating plant growth and development. However, the systematic identification and characterization of WD40 proteins in tomato (Solanum lycopersicum L.) have not been reported. In the present study, we identified 207 WD40 genes in the tomatoes genome and analyzed their chromosomal location, gene structure and evolutionary relationships. A total of 207 tomato WD40 genes were classified by structural domain and phylogenetic tree analyses into five clusters and 12 subfamilies and were found to be unevenly distributed across the 12 tomato chromosomes. We identified six tandem duplication gene pairs and 24 segmental duplication pairs in the WD40 gene family, with segmental duplication being the major mode of expansion in tomatoes. Ka/Ks analysis revealed that paralogs and orthologs of WD40 family genes underwent mainly purifying selection during the evolutionary process. RNA-seq data from different tissues and developmental periods of tomato fruit development showed tissue-specific expression of WD40 genes. In addition, we constructed four coexpression networks according to the transcriptome and metabolome data for WD40 proteins involved in fruit development that may be related to total soluble solid formation. The results provide a comprehensive overview of the tomato WD40 gene family and will provide valuable information for the validation of the function of tomato WD40 genes in fruit development." @default.
- W4380877453 created "2023-06-17" @default.
- W4380877453 creator A5007113126 @default.
- W4380877453 creator A5012033951 @default.
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- W4380877453 creator A5053437207 @default.
- W4380877453 creator A5091845139 @default.
- W4380877453 creator A5092182488 @default.
- W4380877453 date "2023-06-15" @default.
- W4380877453 modified "2023-09-30" @default.
- W4380877453 title "Genome-Wide Identification of the WD40 Gene Family in Tomato (Solanum lycopersicum L.)" @default.
- W4380877453 cites W1709815505 @default.
- W4380877453 cites W1851016533 @default.
- W4380877453 cites W1964012007 @default.
- W4380877453 cites W1965706463 @default.
- W4380877453 cites W1967357725 @default.
- W4380877453 cites W1973046803 @default.
- W4380877453 cites W1978379303 @default.
- W4380877453 cites W1982372752 @default.
- W4380877453 cites W1991103421 @default.
- W4380877453 cites W1996693145 @default.
- W4380877453 cites W2008910497 @default.
- W4380877453 cites W2010790480 @default.
- W4380877453 cites W2011991138 @default.
- W4380877453 cites W2012331775 @default.
- W4380877453 cites W2013108791 @default.
- W4380877453 cites W2020134788 @default.
- W4380877453 cites W2032735361 @default.
- W4380877453 cites W2035908878 @default.
- W4380877453 cites W2036072076 @default.
- W4380877453 cites W2039096418 @default.
- W4380877453 cites W2040473651 @default.
- W4380877453 cites W2040859703 @default.
- W4380877453 cites W2046273050 @default.
- W4380877453 cites W2046970706 @default.
- W4380877453 cites W2049256884 @default.
- W4380877453 cites W2050778896 @default.
- W4380877453 cites W2054561380 @default.
- W4380877453 cites W2059569140 @default.
- W4380877453 cites W2063944697 @default.
- W4380877453 cites W2073347761 @default.
- W4380877453 cites W2079923007 @default.
- W4380877453 cites W2085693287 @default.
- W4380877453 cites W2087852887 @default.
- W4380877453 cites W2089266057 @default.
- W4380877453 cites W2091824071 @default.
- W4380877453 cites W2107277218 @default.
- W4380877453 cites W2122245399 @default.
- W4380877453 cites W2133097698 @default.
- W4380877453 cites W2134152526 @default.
- W4380877453 cites W2135230723 @default.
- W4380877453 cites W2138266741 @default.
- W4380877453 cites W2142678478 @default.
- W4380877453 cites W2143764910 @default.
- W4380877453 cites W2143793098 @default.
- W4380877453 cites W2144006329 @default.
- W4380877453 cites W2149199504 @default.
- W4380877453 cites W2152207030 @default.
- W4380877453 cites W2153934067 @default.
- W4380877453 cites W2154368075 @default.
- W4380877453 cites W2154775341 @default.
- W4380877453 cites W2156231007 @default.
- W4380877453 cites W2158173168 @default.
- W4380877453 cites W2158804744 @default.
- W4380877453 cites W2159675211 @default.
- W4380877453 cites W2165853518 @default.
- W4380877453 cites W2167524002 @default.
- W4380877453 cites W2172610384 @default.
- W4380877453 cites W2191612476 @default.
- W4380877453 cites W2192080449 @default.
- W4380877453 cites W2257237452 @default.
- W4380877453 cites W2409739865 @default.
- W4380877453 cites W2465593026 @default.
- W4380877453 cites W2584097386 @default.
- W4380877453 cites W2591790584 @default.
- W4380877453 cites W2608829646 @default.
- W4380877453 cites W2800206218 @default.
- W4380877453 cites W2800974204 @default.
- W4380877453 cites W2886624742 @default.
- W4380877453 cites W2888287029 @default.
- W4380877453 cites W2900048691 @default.
- W4380877453 cites W2913669705 @default.
- W4380877453 cites W2920608461 @default.
- W4380877453 cites W2950598152 @default.
- W4380877453 cites W2972815725 @default.
- W4380877453 cites W3003447334 @default.
- W4380877453 cites W3010723349 @default.
- W4380877453 cites W3011778558 @default.
- W4380877453 cites W3012225443 @default.
- W4380877453 cites W3035286847 @default.
- W4380877453 cites W3036319615 @default.
- W4380877453 cites W3040304498 @default.
- W4380877453 cites W3093868212 @default.
- W4380877453 cites W3123619901 @default.
- W4380877453 cites W3165386260 @default.
- W4380877453 cites W3169030864 @default.
- W4380877453 cites W4200032634 @default.
- W4380877453 cites W4200092591 @default.