Matches in SemOpenAlex for { <https://semopenalex.org/work/W4381336670> ?p ?o ?g. }
- W4381336670 abstract "A metal-resistant bacterium Pseudomonas parafulva OS-1 was isolated from waste-contaminated soil in Ranchi City, India. The isolated strain OS-1 showed its growth at 25-45°C, pH 5.0-9.0, and in the presence of ZnSO4 (upto 5 mM). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain OS-1 belonged to the genus Pseudomonas and was most closely related to parafulva species. To unravel the genomic features, we sequenced the complete genome of P. parafulva OS-1 using Illumina HiSeq 4,000 sequencing platform. The results of average nucleotide identity (ANI) analysis indicated the closest similarity of OS-1 to P. parafulva PRS09-11288 and P. parafulva DTSP2. The metabolic potential of P. parafulva OS-1 based on Clusters of Othologous Genes (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) indicated a high number of genes related to stress protection, metal resistance, and multiple drug-efflux, etc., which is relatively rare in P. parafulva strains. Compared with other parafulva strains, P. parafulva OS-1 was found to have the unique β-lactam resistance and type VI secretion system (T6SS) gene. Additionally, its genomes encode various CAZymes such as glycoside hydrolases and other genes associated with lignocellulose breakdown, suggesting that strain OS-1 have strong biomass degradation potential. The presence of genomic complexity in the OS-1 genome indicates that horizontal gene transfer (HGT) might happen during evolution. Therefore, genomic and comparative genome analysis of parafulva strains is valuable for further understanding the mechanism of resistance to metal stress and opens a perspective to exploit a newly isolated bacterium for biotechnological applications." @default.
- W4381336670 created "2023-06-21" @default.
- W4381336670 creator A5038856201 @default.
- W4381336670 creator A5055849552 @default.
- W4381336670 creator A5057083796 @default.
- W4381336670 creator A5061999294 @default.
- W4381336670 creator A5066543825 @default.
- W4381336670 creator A5076337645 @default.
- W4381336670 date "2023-06-20" @default.
- W4381336670 modified "2023-10-14" @default.
- W4381336670 title "In-depth genome and pan-genome analysis of a metal-resistant bacterium Pseudomonas parafulva OS-1" @default.
- W4381336670 cites W1540890594 @default.
- W4381336670 cites W1588978217 @default.
- W4381336670 cites W1724577006 @default.
- W4381336670 cites W1900937478 @default.
- W4381336670 cites W1910768798 @default.
- W4381336670 cites W1915542010 @default.
- W4381336670 cites W1963459864 @default.
- W4381336670 cites W1966822396 @default.
- W4381336670 cites W1978237876 @default.
- W4381336670 cites W1982098968 @default.
- W4381336670 cites W1990092789 @default.
- W4381336670 cites W1993299102 @default.
- W4381336670 cites W1994182405 @default.
- W4381336670 cites W1995338871 @default.
- W4381336670 cites W1998824347 @default.
- W4381336670 cites W1999249940 @default.
- W4381336670 cites W2004548026 @default.
- W4381336670 cites W2015749255 @default.
- W4381336670 cites W2016840110 @default.
- W4381336670 cites W2018280419 @default.
- W4381336670 cites W2022534102 @default.
- W4381336670 cites W2026001318 @default.
- W4381336670 cites W2026593005 @default.
- W4381336670 cites W2031366058 @default.
- W4381336670 cites W2036827681 @default.
- W4381336670 cites W2047242127 @default.
- W4381336670 cites W2048942437 @default.
- W4381336670 cites W2055615325 @default.
- W4381336670 cites W2060425093 @default.
- W4381336670 cites W2068143689 @default.
- W4381336670 cites W2069418777 @default.
- W4381336670 cites W2073073672 @default.
- W4381336670 cites W2075955829 @default.
- W4381336670 cites W2078735798 @default.
- W4381336670 cites W2080482202 @default.
- W4381336670 cites W2085408716 @default.
- W4381336670 cites W2089161611 @default.
- W4381336670 cites W2089445063 @default.
- W4381336670 cites W2089590252 @default.
- W4381336670 cites W2091030812 @default.
- W4381336670 cites W2091328482 @default.
- W4381336670 cites W2096093282 @default.
- W4381336670 cites W2096383266 @default.
- W4381336670 cites W2097477547 @default.
- W4381336670 cites W2114511757 @default.
- W4381336670 cites W2118360643 @default.
- W4381336670 cites W2119888547 @default.
- W4381336670 cites W2122025943 @default.
- W4381336670 cites W2124942628 @default.
- W4381336670 cites W2127961755 @default.
- W4381336670 cites W2129968977 @default.
- W4381336670 cites W2130240979 @default.
- W4381336670 cites W2130312510 @default.
- W4381336670 cites W2133074571 @default.
- W4381336670 cites W2133312664 @default.
- W4381336670 cites W2135659368 @default.
- W4381336670 cites W2137207655 @default.
- W4381336670 cites W2141052558 @default.
- W4381336670 cites W2141906439 @default.
- W4381336670 cites W2142503351 @default.
- W4381336670 cites W2146584445 @default.
- W4381336670 cites W2147287701 @default.
- W4381336670 cites W2152207030 @default.
- W4381336670 cites W2154855616 @default.
- W4381336670 cites W2155090350 @default.
- W4381336670 cites W2156133126 @default.
- W4381336670 cites W2156668042 @default.
- W4381336670 cites W2157554375 @default.
- W4381336670 cites W2159482845 @default.
- W4381336670 cites W2163650494 @default.
- W4381336670 cites W2167517017 @default.
- W4381336670 cites W2167603606 @default.
- W4381336670 cites W2167639117 @default.
- W4381336670 cites W2177638519 @default.
- W4381336670 cites W2178637309 @default.
- W4381336670 cites W2219621408 @default.
- W4381336670 cites W2273761496 @default.
- W4381336670 cites W2295238274 @default.
- W4381336670 cites W2307744562 @default.
- W4381336670 cites W2340958225 @default.
- W4381336670 cites W2494318210 @default.
- W4381336670 cites W2509355989 @default.
- W4381336670 cites W2526581014 @default.
- W4381336670 cites W2598352274 @default.
- W4381336670 cites W2602439962 @default.
- W4381336670 cites W2618827967 @default.
- W4381336670 cites W2736610848 @default.
- W4381336670 cites W2760222138 @default.
- W4381336670 cites W2784374520 @default.