FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4381937004> ?p ?o ?g. }

• W4381937004 endingPage "100285" @default.
• W4381937004 startingPage "100285" @default.
• W4381937004 abstract "Wild relatives of cultivated rice (Oryza sativa) belonging to the genus Oryza are regarded as ‘genetic reservoirs’ for rice improvement. Their genes are transferable to cultivated rice through crossing and they have been contributing significantly to rice variety improvement by introgression of their diverse valuable traits, especially biotic stress resistance. Moreover, active use of wild rice resources might be one of the ideal solutions to seek novel or superior alleles/genes to cope with climate change and stable high-yield rice production. DNA markers are essential tools for genetic analysis and breeding. However, to date, there are no suitable DNA marker sets for BB-genome species (O. punctata). In this study, we developed a genome genome-wide InDel marker set evenly distributed (∼2 Mb intervals) across the 12 chromosomes for BB-genome species. The markers were validated by PCR-agarose gel analysis with BB-genome containing species: four accessions each of O. punctata (BB) and O. minuta (BBCC). Out of the 191 InDel markers designed, 184 (96.3%) and 138 (72.2%) were able to differentiate the alleles between O. sativa and O. punctata and between O. sativa and O. minuta respectively. The same marker sets were also tested in other genome types species (CC, CCDD, EE, FF, GG, HHJJ, and KKLL) and one accession of Leersia perrieri (a sister genus to Oryza). The number of polymorphic markers (O. sativa vs other genome types) was drastically reduced in other genome types. In contrast, the number of markers showing no PCR amplification increased, especially in FF, GG, HHJJ, and KKLL species. This suggests that the development of genome type-specific marker sets would be more efficient rather than testing random InDel markers. The newly developed InDel markers maybe be useful for the identification of valuable genetic factors from the BB or BBCC-genome species and also for transferring the identified genes/QTLs into elite variety backgrounds." @default.
• W4381937004 created "2023-06-25" @default.
• W4381937004 creator A5014452759 @default.
• W4381937004 creator A5014867738 @default.
• W4381937004 creator A5022274301 @default.
• W4381937004 creator A5046486171 @default.
• W4381937004 creator A5048574389 @default.
• W4381937004 creator A5064868151 @default.
• W4381937004 creator A5075365923 @default.
• W4381937004 creator A5090740600 @default.
• W4381937004 date "2023-06-01" @default.
• W4381937004 modified "2023-10-16" @default.
• W4381937004 title "Development and validation of a genome-wide InDel marker set discriminating the alleles between the BB-genome Oryza species and rice (O. sativa)" @default.
• W4381937004 cites W1967043852 @default.
• W4381937004 cites W2127241850 @default.
• W4381937004 cites W2290381122 @default.
• W4381937004 cites W2314086176 @default.
• W4381937004 cites W2428429272 @default.
• W4381937004 cites W2782974471 @default.
• W4381937004 cites W2807452401 @default.
• W4381937004 cites W2888624593 @default.
• W4381937004 cites W3129100005 @default.
• W4381937004 cites W3157541343 @default.
• W4381937004 cites W4220707671 @default.
• W4381937004 cites W4308459633 @default.
• W4381937004 doi "https://doi.org/10.1016/j.cpb.2023.100285" @default.
• W4381937004 hasPublicationYear "2023" @default.
• W4381937004 type Work @default.
• W4381937004 citedByCount "0" @default.
• W4381937004 crossrefType "journal-article" @default.
• W4381937004 hasAuthorship W4381937004A5014452759 @default.
• W4381937004 hasAuthorship W4381937004A5014867738 @default.
• W4381937004 hasAuthorship W4381937004A5022274301 @default.
• W4381937004 hasAuthorship W4381937004A5046486171 @default.
• W4381937004 hasAuthorship W4381937004A5048574389 @default.
• W4381937004 hasAuthorship W4381937004A5064868151 @default.
• W4381937004 hasAuthorship W4381937004A5075365923 @default.
• W4381937004 hasAuthorship W4381937004A5090740600 @default.
• W4381937004 hasBestOaLocation W43819370041 @default.
• W4381937004 hasConcept C104317684 @default.
• W4381937004 hasConcept C119054055 @default.
• W4381937004 hasConcept C135763542 @default.
• W4381937004 hasConcept C141231307 @default.
• W4381937004 hasConcept C153209595 @default.
• W4381937004 hasConcept C180754005 @default.
• W4381937004 hasConcept C190789776 @default.
• W4381937004 hasConcept C2777923347 @default.
• W4381937004 hasConcept C2778543611 @default.
• W4381937004 hasConcept C54355233 @default.
• W4381937004 hasConcept C61271108 @default.
• W4381937004 hasConcept C8182607 @default.
• W4381937004 hasConcept C86803240 @default.
• W4381937004 hasConceptScore W4381937004C104317684 @default.
• W4381937004 hasConceptScore W4381937004C119054055 @default.
• W4381937004 hasConceptScore W4381937004C135763542 @default.
• W4381937004 hasConceptScore W4381937004C141231307 @default.
• W4381937004 hasConceptScore W4381937004C153209595 @default.
• W4381937004 hasConceptScore W4381937004C180754005 @default.
• W4381937004 hasConceptScore W4381937004C190789776 @default.
• W4381937004 hasConceptScore W4381937004C2777923347 @default.
• W4381937004 hasConceptScore W4381937004C2778543611 @default.
• W4381937004 hasConceptScore W4381937004C54355233 @default.
• W4381937004 hasConceptScore W4381937004C61271108 @default.
• W4381937004 hasConceptScore W4381937004C8182607 @default.
• W4381937004 hasConceptScore W4381937004C86803240 @default.
• W4381937004 hasLocation W43819370041 @default.
• W4381937004 hasOpenAccess W4381937004 @default.
• W4381937004 hasPrimaryLocation W43819370041 @default.
• W4381937004 hasRelatedWork W1991177411 @default.
• W4381937004 hasRelatedWork W2003922337 @default.
• W4381937004 hasRelatedWork W2039489493 @default.
• W4381937004 hasRelatedWork W2148914856 @default.
• W4381937004 hasRelatedWork W2800434159 @default.
• W4381937004 hasRelatedWork W2900882586 @default.
• W4381937004 hasRelatedWork W3120006560 @default.
• W4381937004 hasRelatedWork W3157541343 @default.
• W4381937004 hasRelatedWork W4249920773 @default.
• W4381937004 hasRelatedWork W4304087150 @default.
• W4381937004 hasVolume "34" @default.
• W4381937004 isParatext "false" @default.
• W4381937004 isRetracted "false" @default.
• W4381937004 workType "article" @default.