Matches in SemOpenAlex for { <https://semopenalex.org/work/W4382137894> ?p ?o ?g. }
- W4382137894 abstract "Abstract Background Waterhemp ( Amaranthus tuberculatus (Moq.) Sauer) and Palmer amaranth ( Amaranthus palmeri S. Wats.) are two dioecious and important weed species in the world that can rapidly evolve herbicide-resistance traits. Understanding these two species' dioecious and sex-determination mechanisms could open opportunities for new tools to control them. This study aims to identify the differential expression patterns between males and females in A. tuberculatus and A. palmeri . Multiple analyses, including differential expression, co-expression, and promoter analyses, used RNA-seq data from multiple tissue types to identify putative essential genes for sex determination in both dioecious species. Results Genes were identified as potential key players for sex determination in A. palmeri. Genes PPR247 , WEX, and ACD6 were differentially expressed between the sexes and located at scaffold 20 within or near the male-specific Y (MSY) region. Multiple genes involved with flower development were co-expressed with these three genes. For A. tuberculatus, no differentially expressed gene was identified within the MSY region; however, multiple autosomal class B and C genes were identified as differentially expressed and possible candidate genes. Conclusions This is the first study comparing the global expression profile between males and females in dioecious weedy Amaranthus species. Results narrow down putative essential genes for sex-determination in A. palmeri and A. tuberculatus and also strengthen the hypothesis of two different evolutionary events for dioecy within the genus." @default.
- W4382137894 created "2023-06-27" @default.
- W4382137894 creator A5031677862 @default.
- W4382137894 creator A5036724519 @default.
- W4382137894 creator A5053791780 @default.
- W4382137894 date "2023-06-26" @default.
- W4382137894 modified "2023-10-08" @default.
- W4382137894 title "Comparative transcriptomic analysis of male and females in the dioecious weeds Amaranthus palmeri and Amaranthus tuberculatus" @default.
- W4382137894 cites W1270834676 @default.
- W4382137894 cites W1767747470 @default.
- W4382137894 cites W1839602725 @default.
- W4382137894 cites W1934690324 @default.
- W4382137894 cites W1963743411 @default.
- W4382137894 cites W1966327575 @default.
- W4382137894 cites W1968182887 @default.
- W4382137894 cites W1970043681 @default.
- W4382137894 cites W1972231941 @default.
- W4382137894 cites W1980962066 @default.
- W4382137894 cites W1981003747 @default.
- W4382137894 cites W1982158087 @default.
- W4382137894 cites W1983455650 @default.
- W4382137894 cites W1992385083 @default.
- W4382137894 cites W1993766938 @default.
- W4382137894 cites W1995385966 @default.
- W4382137894 cites W1995624603 @default.
- W4382137894 cites W1997332543 @default.
- W4382137894 cites W2005399097 @default.
- W4382137894 cites W2007280067 @default.
- W4382137894 cites W2007544271 @default.
- W4382137894 cites W2009227275 @default.
- W4382137894 cites W2011199468 @default.
- W4382137894 cites W2011657487 @default.
- W4382137894 cites W2014812831 @default.
- W4382137894 cites W2014818672 @default.
- W4382137894 cites W2015999383 @default.
- W4382137894 cites W2017861498 @default.
- W4382137894 cites W2024827054 @default.
- W4382137894 cites W2025232260 @default.
- W4382137894 cites W2025313780 @default.
- W4382137894 cites W2030966943 @default.
- W4382137894 cites W2033457104 @default.
- W4382137894 cites W2033759019 @default.
- W4382137894 cites W2039081075 @default.
- W4382137894 cites W2045672924 @default.
- W4382137894 cites W2046269809 @default.
- W4382137894 cites W2046970729 @default.
- W4382137894 cites W2051657543 @default.
- W4382137894 cites W2053717030 @default.
- W4382137894 cites W2062564328 @default.
- W4382137894 cites W2064809995 @default.
- W4382137894 cites W2068177982 @default.
- W4382137894 cites W2069591926 @default.
- W4382137894 cites W2070287693 @default.
- W4382137894 cites W2074679883 @default.
- W4382137894 cites W2075211171 @default.
- W4382137894 cites W2075282423 @default.
- W4382137894 cites W2077279396 @default.
- W4382137894 cites W2081341258 @default.
- W4382137894 cites W2092806862 @default.
- W4382137894 cites W2095861170 @default.
- W4382137894 cites W2096652586 @default.
- W4382137894 cites W2101074714 @default.
- W4382137894 cites W2101713026 @default.
- W4382137894 cites W2102759886 @default.
- W4382137894 cites W2106678197 @default.
- W4382137894 cites W2107003437 @default.
- W4382137894 cites W2107277218 @default.
- W4382137894 cites W2108234281 @default.
- W4382137894 cites W2108593192 @default.
- W4382137894 cites W2109757583 @default.
- W4382137894 cites W2114104545 @default.
- W4382137894 cites W2115662199 @default.
- W4382137894 cites W2115824182 @default.
- W4382137894 cites W2118030211 @default.
- W4382137894 cites W2119398371 @default.
- W4382137894 cites W2123313379 @default.
- W4382137894 cites W2123952745 @default.
- W4382137894 cites W2124799197 @default.
- W4382137894 cites W2125158282 @default.
- W4382137894 cites W2125237237 @default.
- W4382137894 cites W2125905605 @default.
- W4382137894 cites W2125973383 @default.
- W4382137894 cites W2128615486 @default.
- W4382137894 cites W2130472562 @default.
- W4382137894 cites W2131271579 @default.
- W4382137894 cites W2133532458 @default.
- W4382137894 cites W2135062466 @default.
- W4382137894 cites W2136170412 @default.
- W4382137894 cites W2137068081 @default.
- W4382137894 cites W2137167825 @default.
- W4382137894 cites W2139724663 @default.
- W4382137894 cites W2140415861 @default.
- W4382137894 cites W2144930248 @default.
- W4382137894 cites W2148485670 @default.
- W4382137894 cites W2152111284 @default.
- W4382137894 cites W2152207030 @default.
- W4382137894 cites W2153382278 @default.
- W4382137894 cites W2153800442 @default.
- W4382137894 cites W2155150900 @default.
- W4382137894 cites W2155628349 @default.