FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4382932320> ?p ?o ?g. }

• W4382932320 endingPage "448" @default.
• W4382932320 startingPage "448" @default.
• W4382932320 abstract "<ns4:p><ns4:bold>Background:</ns4:bold> The common ice plant (<ns4:italic>Mesembryanthemum crystallinum</ns4:italic> L.) is an annual herb belonging to the genus Mesembryanthemum of the family Aizoaceae, native to Southern Africa.</ns4:p><ns4:p> <ns4:bold>Methods: </ns4:bold>We performed shotgun genome paired-end sequencing using the Illumina platform to determine the genome sequence of the ice plants. We assembled the whole genome sequences using the genome assembler “ALGA” and “Redundans”, then released them as available genomic information. Finally, we mainly estimated the potential genomic function by the homology search method.</ns4:p><ns4:p> <ns4:bold>Results:</ns4:bold> A draft genome was generated with a total length of 286 Mb corresponding to 79.2% of the estimated genome size (361 Mb), consisting of 49,782 contigs. It encompassed 93.49% of the genes of terrestrial higher plants, 99.5% of the ice plant transcriptome, and 100% of known DNA sequences. In addition, 110.9 Mb (38.8%) of repetitive sequences and untranslated regions, 971 tRNA, and 100 miRNA loci were identified, and their effects on stress tolerance and photosynthesis were investigated. Molecular phylogenetic analysis based on ribosomal DNA among 26 kinds of plant species revealed genetic similarity between the ice plant and poplar, which have salt tolerance. Overall, 35,702 protein-coding regions were identified in the genome, of which 56.05% to 82.59% were annotated and submitted to domain searches and gene ontology (GO) analyses, which found that eighteen GO terms stood out among five plant species. These terms were related to biological defense, growth, reproduction, transcription, post-transcription, and intermembrane transportation, regarded as one of the fundamental results of using the utilized ice plant genome.</ns4:p><ns4:p> <ns4:bold>Conclusions:</ns4:bold> The information that we characterized is useful for elucidation of the mechanism of growth promotion under salinity and reversible conversion of the photosynthetic type from C3 to Crassulacean Acid Metabolism (CAM).</ns4:p>" @default.
• W4382932320 created "2023-07-04" @default.
• W4382932320 creator A5048091436 @default.
• W4382932320 creator A5054585224 @default.
• W4382932320 creator A5058953921 @default.
• W4382932320 date "2023-07-03" @default.
• W4382932320 modified "2023-09-26" @default.
• W4382932320 title "The first released available genome of the common ice plant (Mesembryanthemum crystallinum L.) extended the research region on salt tolerance, C3-CAM photosynthetic conversion, and halophism" @default.
• W4382932320 cites W1482190741 @default.
• W4382932320 cites W1969402038 @default.
• W4382932320 cites W1974346253 @default.
• W4382932320 cites W1988715006 @default.
• W4382932320 cites W1992773451 @default.
• W4382932320 cites W2014099509 @default.
• W4382932320 cites W2028011340 @default.
• W4382932320 cites W2033882896 @default.
• W4382932320 cites W2035776691 @default.
• W4382932320 cites W2036528669 @default.
• W4382932320 cites W2037285002 @default.
• W4382932320 cites W2049957807 @default.
• W4382932320 cites W2062688871 @default.
• W4382932320 cites W2077545872 @default.
• W4382932320 cites W2087819268 @default.
• W4382932320 cites W2091922579 @default.
• W4382932320 cites W2093250314 @default.
• W4382932320 cites W2094910852 @default.
• W4382932320 cites W2095478872 @default.
• W4382932320 cites W2096128575 @default.
• W4382932320 cites W2103148772 @default.
• W4382932320 cites W2108004308 @default.
• W4382932320 cites W2111829451 @default.
• W4382932320 cites W2112956791 @default.
• W4382932320 cites W2114606410 @default.
• W4382932320 cites W2115460333 @default.
• W4382932320 cites W2119991023 @default.
• W4382932320 cites W2132141594 @default.
• W4382932320 cites W2133528607 @default.
• W4382932320 cites W2135439994 @default.
• W4382932320 cites W2137057349 @default.
• W4382932320 cites W2141152740 @default.
• W4382932320 cites W2167637196 @default.
• W4382932320 cites W2170874734 @default.
• W4382932320 cites W2294878998 @default.
• W4382932320 cites W2344852138 @default.
• W4382932320 cites W2516163109 @default.
• W4382932320 cites W2519476176 @default.
• W4382932320 cites W2529592713 @default.
• W4382932320 cites W2529838505 @default.
• W4382932320 cites W2728848998 @default.
• W4382932320 cites W2799871824 @default.
• W4382932320 cites W2810559135 @default.
• W4382932320 cites W2883030905 @default.
• W4382932320 cites W2900536309 @default.
• W4382932320 cites W2913044685 @default.
• W4382932320 cites W2918063357 @default.
• W4382932320 cites W2918135497 @default.
• W4382932320 cites W2940690307 @default.
• W4382932320 cites W2950006249 @default.
• W4382932320 cites W2955502993 @default.
• W4382932320 cites W2965148329 @default.
• W4382932320 cites W2965883971 @default.
• W4382932320 cites W2969982951 @default.
• W4382932320 cites W2980799756 @default.
• W4382932320 cites W2988450967 @default.
• W4382932320 cites W3012094285 @default.
• W4382932320 cites W3014940794 @default.
• W4382932320 cites W3017049640 @default.
• W4382932320 cites W3031999065 @default.
• W4382932320 cites W3095583226 @default.
• W4382932320 cites W3102107673 @default.
• W4382932320 cites W3119984181 @default.
• W4382932320 cites W3122985109 @default.
• W4382932320 cites W3124747858 @default.
• W4382932320 cites W3135097467 @default.
• W4382932320 cites W3143063265 @default.
• W4382932320 cites W3150167015 @default.
• W4382932320 cites W3155278170 @default.
• W4382932320 cites W3167780481 @default.
• W4382932320 cites W3181891194 @default.
• W4382932320 cites W3186737374 @default.
• W4382932320 cites W3195010157 @default.
• W4382932320 cites W3195775119 @default.
• W4382932320 cites W4200564640 @default.
• W4382932320 cites W4206197042 @default.
• W4382932320 cites W4206336695 @default.
• W4382932320 cites W4220831425 @default.
• W4382932320 cites W4224214505 @default.
• W4382932320 cites W4226124451 @default.
• W4382932320 cites W4226329305 @default.
• W4382932320 cites W4285589610 @default.
• W4382932320 cites W4322738103 @default.
• W4382932320 cites W4323968736 @default.
• W4382932320 doi "https://doi.org/10.12688/f1000research.129958.2" @default.
• W4382932320 hasPublicationYear "2023" @default.
• W4382932320 type Work @default.
• W4382932320 citedByCount "0" @default.
• W4382932320 crossrefType "journal-article" @default.
• W4382932320 hasAuthorship W4382932320A5048091436 @default.

• next