FRINK Linked Data Fragments server

Matches in SemOpenAlex for { <https://semopenalex.org/work/W4384283088> ?p ?o ?g. }

• W4384283088 abstract "RNA velocity is closely related with cell fate and is an important indicator for the prediction of cell states with elegant physical explanation derived from single-cell RNA-seq data. However, most existing RNA velocity models can only be applied to datasets with unspliced/spliced or new/total RNA abundance information. Moreover, the dynamics constructed by these models can not fit the co-expression of spliced and unspliced RNAs well. Motivated by the finding that RNA velocity could be driven by the transcriptional regulation, we propose TFvelo, which expands RNA velocity concept to various single-cell datasets without splicing information, by introducing gene regulatory network information. Our experiments on synthetic data and scRNA-Seq data demonstrate that TFvelo can better model the gene dynamics, infer cell pseudo-time and trajectory, and also detect the key TF-target regulation simultaneously. TFvelo opens a novel, robust and accurate avenue for modeling RNA velocity for single cell data." @default.
• W4384283088 created "2023-07-15" @default.
• W4384283088 creator A5054999570 @default.
• W4384283088 creator A5064600744 @default.
• W4384283088 creator A5076024045 @default.
• W4384283088 creator A5089682237 @default.
• W4384283088 date "2023-07-14" @default.
• W4384283088 modified "2023-10-18" @default.
• W4384283088 title "TFvelo: gene regulation inspired RNA velocity estimation" @default.
• W4384283088 cites W1967639437 @default.
• W4384283088 cites W2005660297 @default.
• W4384283088 cites W2009104211 @default.
• W4384283088 cites W2014702774 @default.
• W4384283088 cites W2024095146 @default.
• W4384283088 cites W2054336414 @default.
• W4384283088 cites W2066450693 @default.
• W4384283088 cites W2069295116 @default.
• W4384283088 cites W2080706628 @default.
• W4384283088 cites W2080840041 @default.
• W4384283088 cites W2098023402 @default.
• W4384283088 cites W2233603983 @default.
• W4384283088 cites W2247766769 @default.
• W4384283088 cites W2523369352 @default.
• W4384283088 cites W2766437506 @default.
• W4384283088 cites W2889745339 @default.
• W4384283088 cites W2907783748 @default.
• W4384283088 cites W2912272542 @default.
• W4384283088 cites W2926010705 @default.
• W4384283088 cites W2936935677 @default.
• W4384283088 cites W3007172120 @default.
• W4384283088 cites W3013823153 @default.
• W4384283088 cites W3015971553 @default.
• W4384283088 cites W3047141442 @default.
• W4384283088 cites W3048227929 @default.
• W4384283088 cites W3156304677 @default.
• W4384283088 cites W3175762303 @default.
• W4384283088 cites W3183821540 @default.
• W4384283088 cites W3194520274 @default.
• W4384283088 cites W4200278514 @default.
• W4384283088 cites W4210575300 @default.
• W4384283088 cites W4220718559 @default.
• W4384283088 cites W4225016428 @default.
• W4384283088 cites W4225287929 @default.
• W4384283088 cites W4225591005 @default.
• W4384283088 cites W4280600462 @default.
• W4384283088 cites W4285013048 @default.
• W4384283088 cites W4297051670 @default.
• W4384283088 cites W4308484211 @default.
• W4384283088 cites W2160281251 @default.
• W4384283088 doi "https://doi.org/10.1101/2023.07.12.548785" @default.
• W4384283088 hasPublicationYear "2023" @default.
• W4384283088 type Work @default.
• W4384283088 citedByCount "0" @default.
• W4384283088 crossrefType "posted-content" @default.
• W4384283088 hasAuthorship W4384283088A5054999570 @default.
• W4384283088 hasAuthorship W4384283088A5064600744 @default.
• W4384283088 hasAuthorship W4384283088A5076024045 @default.
• W4384283088 hasAuthorship W4384283088A5089682237 @default.
• W4384283088 hasBestOaLocation W43842830881 @default.
• W4384283088 hasConcept C104317684 @default.
• W4384283088 hasConcept C121332964 @default.
• W4384283088 hasConcept C1276947 @default.
• W4384283088 hasConcept C13662910 @default.
• W4384283088 hasConcept C145912823 @default.
• W4384283088 hasConcept C150194340 @default.
• W4384283088 hasConcept C24890656 @default.
• W4384283088 hasConcept C41008148 @default.
• W4384283088 hasConcept C54355233 @default.
• W4384283088 hasConcept C54458228 @default.
• W4384283088 hasConcept C67705224 @default.
• W4384283088 hasConcept C70721500 @default.
• W4384283088 hasConcept C86803240 @default.
• W4384283088 hasConceptScore W4384283088C104317684 @default.
• W4384283088 hasConceptScore W4384283088C121332964 @default.
• W4384283088 hasConceptScore W4384283088C1276947 @default.
• W4384283088 hasConceptScore W4384283088C13662910 @default.
• W4384283088 hasConceptScore W4384283088C145912823 @default.
• W4384283088 hasConceptScore W4384283088C150194340 @default.
• W4384283088 hasConceptScore W4384283088C24890656 @default.
• W4384283088 hasConceptScore W4384283088C41008148 @default.
• W4384283088 hasConceptScore W4384283088C54355233 @default.
• W4384283088 hasConceptScore W4384283088C54458228 @default.
• W4384283088 hasConceptScore W4384283088C67705224 @default.
• W4384283088 hasConceptScore W4384283088C70721500 @default.
• W4384283088 hasConceptScore W4384283088C86803240 @default.
• W4384283088 hasLocation W43842830881 @default.
• W4384283088 hasOpenAccess W4384283088 @default.
• W4384283088 hasPrimaryLocation W43842830881 @default.
• W4384283088 hasRelatedWork W2039473718 @default.
• W4384283088 hasRelatedWork W2383578611 @default.
• W4384283088 hasRelatedWork W2387529410 @default.
• W4384283088 hasRelatedWork W2987583674 @default.
• W4384283088 hasRelatedWork W3023605104 @default.
• W4384283088 hasRelatedWork W3186928667 @default.
• W4384283088 hasRelatedWork W4224241862 @default.
• W4384283088 hasRelatedWork W4323768008 @default.
• W4384283088 hasRelatedWork W4360995134 @default.
• W4384283088 hasRelatedWork W1941703695 @default.
• W4384283088 isParatext "false" @default.
• W4384283088 isRetracted "false" @default.

• next