Matches in SemOpenAlex for { <https://semopenalex.org/work/W4385156656> ?p ?o ?g. }
Showing items 1 to 81 of
81
with 100 items per page.
- W4385156656 abstract "CRISPR screens are increasingly performed to associate genotypes with genotypes. So far, however, their analysis required specialized computational knowledge to transform high-throughput next-generation sequencing (NGS) data into sequence formats amenable for downstream analysis. We developed ReCo, a stand-alone and user-friendly analytics tool for generating read-count tables of single and combinatorial CRISPR library and screen-based NGS data. Together with cutadapt and bowtie2 for rapid sequence trimming and alignment, ReCo enables the automated generation of read count tables from staggered NGS reads for the downstream identification of gRNA-induced phenotypes.ReCo is published under the MIT license and available at: https://github.com/KaulichLab/ReCo." @default.
- W4385156656 created "2023-07-24" @default.
- W4385156656 creator A5050030738 @default.
- W4385156656 creator A5061010822 @default.
- W4385156656 date "2023-07-22" @default.
- W4385156656 modified "2023-09-23" @default.
- W4385156656 title "ReCo: automated NGS <i> <u>re</u> </i>ad-<i> <u>co</u> </i>unting of single and combinatorial CRISPR gRNAs" @default.
- W4385156656 cites W1973260880 @default.
- W4385156656 cites W1982846895 @default.
- W4385156656 cites W2045435533 @default.
- W4385156656 cites W2064815984 @default.
- W4385156656 cites W2152505144 @default.
- W4385156656 cites W2170551349 @default.
- W4385156656 cites W2252568502 @default.
- W4385156656 cites W2770300757 @default.
- W4385156656 cites W2811037407 @default.
- W4385156656 cites W2919380816 @default.
- W4385156656 cites W3035764705 @default.
- W4385156656 cites W3042582592 @default.
- W4385156656 cites W3157276932 @default.
- W4385156656 cites W4200424290 @default.
- W4385156656 cites W4211219428 @default.
- W4385156656 cites W4317437864 @default.
- W4385156656 doi "https://doi.org/10.1093/bioinformatics/btad448" @default.
- W4385156656 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/37481709" @default.
- W4385156656 hasPublicationYear "2023" @default.
- W4385156656 type Work @default.
- W4385156656 citedByCount "0" @default.
- W4385156656 crossrefType "journal-article" @default.
- W4385156656 hasAuthorship W4385156656A5050030738 @default.
- W4385156656 hasAuthorship W4385156656A5061010822 @default.
- W4385156656 hasBestOaLocation W43851566561 @default.
- W4385156656 hasConcept C104317684 @default.
- W4385156656 hasConcept C111919701 @default.
- W4385156656 hasConcept C124101348 @default.
- W4385156656 hasConcept C132455925 @default.
- W4385156656 hasConcept C157764524 @default.
- W4385156656 hasConcept C174183944 @default.
- W4385156656 hasConcept C2780560020 @default.
- W4385156656 hasConcept C41008148 @default.
- W4385156656 hasConcept C51679486 @default.
- W4385156656 hasConcept C54355233 @default.
- W4385156656 hasConcept C555944384 @default.
- W4385156656 hasConcept C70721500 @default.
- W4385156656 hasConcept C79158427 @default.
- W4385156656 hasConcept C86803240 @default.
- W4385156656 hasConcept C97702854 @default.
- W4385156656 hasConcept C98108389 @default.
- W4385156656 hasConceptScore W4385156656C104317684 @default.
- W4385156656 hasConceptScore W4385156656C111919701 @default.
- W4385156656 hasConceptScore W4385156656C124101348 @default.
- W4385156656 hasConceptScore W4385156656C132455925 @default.
- W4385156656 hasConceptScore W4385156656C157764524 @default.
- W4385156656 hasConceptScore W4385156656C174183944 @default.
- W4385156656 hasConceptScore W4385156656C2780560020 @default.
- W4385156656 hasConceptScore W4385156656C41008148 @default.
- W4385156656 hasConceptScore W4385156656C51679486 @default.
- W4385156656 hasConceptScore W4385156656C54355233 @default.
- W4385156656 hasConceptScore W4385156656C555944384 @default.
- W4385156656 hasConceptScore W4385156656C70721500 @default.
- W4385156656 hasConceptScore W4385156656C79158427 @default.
- W4385156656 hasConceptScore W4385156656C86803240 @default.
- W4385156656 hasConceptScore W4385156656C97702854 @default.
- W4385156656 hasConceptScore W4385156656C98108389 @default.
- W4385156656 hasLocation W43851566561 @default.
- W4385156656 hasLocation W43851566562 @default.
- W4385156656 hasOpenAccess W4385156656 @default.
- W4385156656 hasPrimaryLocation W43851566561 @default.
- W4385156656 hasRelatedWork W2134298288 @default.
- W4385156656 hasRelatedWork W2172149993 @default.
- W4385156656 hasRelatedWork W2305742620 @default.
- W4385156656 hasRelatedWork W2951741674 @default.
- W4385156656 hasRelatedWork W2952884279 @default.
- W4385156656 hasRelatedWork W2989961838 @default.
- W4385156656 hasRelatedWork W2994205747 @default.
- W4385156656 hasRelatedWork W3133668443 @default.
- W4385156656 hasRelatedWork W4225407011 @default.
- W4385156656 hasRelatedWork W4316040384 @default.
- W4385156656 isParatext "false" @default.
- W4385156656 isRetracted "false" @default.
- W4385156656 workType "article" @default.