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- W4385254328 abstract "Abstract Polyploidization can provide a wealth of genetic variation for adaptive evolution and speciation, but understanding the mechanisms of subgenome evolution as well as its dynamics and ultimate consequences remains elusive. Here, we report the telomere-to-telomere (T2T) gap-free reference genome of allotetraploid horseradish ( Armoracia rusticana ) sequenced using a comprehensive strategy. The (epi)genomic architecture and 3D chromatin structure of the A and B subgenomes differ significantly, suggesting that both the dynamics of the dominant long terminal repeat retrotransposons and DNA methylation have played critical roles in subgenome diversification. Investigation of the genetic basis of biosynthesis of glucosinolates (GSLs) and horseradish peroxidases reveals both the important role of polyploidization and subgenome differentiation in shaping the key traits. Continuous duplication and divergence of essential genes of GSL biosynthesis (e.g., FMO GS-OX , IGMT , and GH1 gene family) contribute to the broad GSL profile in horseradish. Overall, the T2T assembly of the allotetraploid horseradish genome expands our understanding of polyploid genome evolution and provides a fundamental genetic resource for breeding and genetic improvement of horseradish." @default.
- W4385254328 created "2023-07-26" @default.
- W4385254328 creator A5021039651 @default.
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- W4385254328 creator A5063339376 @default.
- W4385254328 creator A5068232999 @default.
- W4385254328 creator A5088357346 @default.
- W4385254328 date "2023-07-25" @default.
- W4385254328 modified "2023-09-30" @default.
- W4385254328 title "The allotetraploid horseradish genome provides insights into subgenome diversification and formation of critical traits" @default.
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