Matches in SemOpenAlex for { <https://semopenalex.org/work/W4385667036> ?p ?o ?g. }
Showing items 1 to 85 of
85
with 100 items per page.
- W4385667036 abstract "Abstract It has been shown that Hi-C can be used as a powerful tool to detect structural variations (SVs) and enhancer hijacking events. However, there has been no existing programs that can directly visualize and detect such events on a personal computer, which hinders the broad adaption of the technology for intuitive discovery in cancer studies. Here, we introduce the EagleC Explorer, a desktop software that is specifically designed for exploring Hi-C and other chromatin contact data in cancer genomes. EagleC Explorer has a set of unique features, including 1) conveniently visualizing global and local Hi-C data; 2) interactively detecting SVs on a Hi-C map for any user-selected region on screen within seconds, using a deep-learning model; 3) reconstructing local Hi-C map surrounding user-provided SVs and generating publication-quality figures; 4) detecting enhancer hijacking events for any user-suggested regions on screen. In addition, EagleC Explorer can also incorporate other genomic tracks such as RNA-Seq or ChIP-Seq to facilitate scientists for integrative data analysis and making novel discoveries." @default.
- W4385667036 created "2023-08-09" @default.
- W4385667036 creator A5035614658 @default.
- W4385667036 creator A5047645830 @default.
- W4385667036 creator A5074633093 @default.
- W4385667036 date "2023-08-08" @default.
- W4385667036 modified "2023-09-25" @default.
- W4385667036 title "EagleC Explorer: A desktop application for interactively detecting and visualizing SVs and enhancer hijacking on Hi-C contact maps" @default.
- W4385667036 cites W1973062929 @default.
- W4385667036 cites W1978902427 @default.
- W4385667036 cites W2090037139 @default.
- W4385667036 cites W2102140136 @default.
- W4385667036 cites W2161535481 @default.
- W4385667036 cites W2268032794 @default.
- W4385667036 cites W2481029670 @default.
- W4385667036 cites W2493763501 @default.
- W4385667036 cites W2555451680 @default.
- W4385667036 cites W2567512722 @default.
- W4385667036 cites W2729264945 @default.
- W4385667036 cites W2888425844 @default.
- W4385667036 cites W2891870314 @default.
- W4385667036 cites W2952744897 @default.
- W4385667036 cites W2956644939 @default.
- W4385667036 cites W2960979937 @default.
- W4385667036 cites W2986448893 @default.
- W4385667036 cites W3014004911 @default.
- W4385667036 cites W3041895828 @default.
- W4385667036 cites W3166957378 @default.
- W4385667036 cites W4225279860 @default.
- W4385667036 cites W4282929864 @default.
- W4385667036 cites W4307659092 @default.
- W4385667036 cites W4381308600 @default.
- W4385667036 doi "https://doi.org/10.1101/2023.08.07.552228" @default.
- W4385667036 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/37609202" @default.
- W4385667036 hasPublicationYear "2023" @default.
- W4385667036 type Work @default.
- W4385667036 citedByCount "0" @default.
- W4385667036 crossrefType "posted-content" @default.
- W4385667036 hasAuthorship W4385667036A5035614658 @default.
- W4385667036 hasAuthorship W4385667036A5047645830 @default.
- W4385667036 hasAuthorship W4385667036A5074633093 @default.
- W4385667036 hasBestOaLocation W43856670361 @default.
- W4385667036 hasConcept C104317684 @default.
- W4385667036 hasConcept C111919701 @default.
- W4385667036 hasConcept C111936080 @default.
- W4385667036 hasConcept C121684516 @default.
- W4385667036 hasConcept C177264268 @default.
- W4385667036 hasConcept C199360897 @default.
- W4385667036 hasConcept C2777904410 @default.
- W4385667036 hasConcept C37789001 @default.
- W4385667036 hasConcept C41008148 @default.
- W4385667036 hasConcept C54355233 @default.
- W4385667036 hasConcept C70721500 @default.
- W4385667036 hasConcept C86339819 @default.
- W4385667036 hasConcept C86803240 @default.
- W4385667036 hasConceptScore W4385667036C104317684 @default.
- W4385667036 hasConceptScore W4385667036C111919701 @default.
- W4385667036 hasConceptScore W4385667036C111936080 @default.
- W4385667036 hasConceptScore W4385667036C121684516 @default.
- W4385667036 hasConceptScore W4385667036C177264268 @default.
- W4385667036 hasConceptScore W4385667036C199360897 @default.
- W4385667036 hasConceptScore W4385667036C2777904410 @default.
- W4385667036 hasConceptScore W4385667036C37789001 @default.
- W4385667036 hasConceptScore W4385667036C41008148 @default.
- W4385667036 hasConceptScore W4385667036C54355233 @default.
- W4385667036 hasConceptScore W4385667036C70721500 @default.
- W4385667036 hasConceptScore W4385667036C86339819 @default.
- W4385667036 hasConceptScore W4385667036C86803240 @default.
- W4385667036 hasLocation W43856670361 @default.
- W4385667036 hasLocation W43856670362 @default.
- W4385667036 hasOpenAccess W4385667036 @default.
- W4385667036 hasPrimaryLocation W43856670361 @default.
- W4385667036 hasRelatedWork W2016015848 @default.
- W4385667036 hasRelatedWork W2152841149 @default.
- W4385667036 hasRelatedWork W2166770943 @default.
- W4385667036 hasRelatedWork W2586783543 @default.
- W4385667036 hasRelatedWork W2973036402 @default.
- W4385667036 hasRelatedWork W3091016370 @default.
- W4385667036 hasRelatedWork W3098339315 @default.
- W4385667036 hasRelatedWork W37183307 @default.
- W4385667036 hasRelatedWork W571447959 @default.
- W4385667036 hasRelatedWork W842314643 @default.
- W4385667036 isParatext "false" @default.
- W4385667036 isRetracted "false" @default.
- W4385667036 workType "article" @default.