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- W4386003331 abstract "Haptophyte algae, including coccolithophores, play key roles in global carbon cycling and ecosystem. They exhibit exceptional morphological and functional diversity. Whereas, their phylogeny is mostly based on short markers and genome researches are always limited to few species, hindering a better understanding about their evolution and diversification. In this study, by assembling 69 new plastid genomes, 65 new mitochondrial genomes, and 55 nuclear drafts, we systematically analyzed their genome variations and build the most comprehensive phylogenies in haptophytes and Noelaerhabdaceae, with the latter is the family of the model coccolithophore Emiliania huxleyi. The haptophyte genomes vary significantly in size, gene content, and structure. We detected a phylogenetic incongruence of Prymnesiales between genome compartments. In Noelaerhabdaceae, by including Reticulofenestra sessilis and a proper outgroup, we found R. sessilis was not the basal taxon of this family. Noelaerhabdaceae strains have very similar genomic features and conserved sequences, but different gene content and dynamic structure. We speculate that was caused by DNA double-strand break repairs. Our results provide valuable genetic resources and many new insights into the evolution of haptophytes, especially coccolithophores." @default.
- W4386003331 created "2023-08-20" @default.
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- W4386003331 date "2023-12-01" @default.
- W4386003331 modified "2023-10-12" @default.
- W4386003331 title "Phylogeny and genetic variations of the three genome compartments in haptophytes shed light on the rapid evolution of coccolithophores" @default.
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- W4386003331 doi "https://doi.org/10.1016/j.gene.2023.147716" @default.
- W4386003331 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/37604324" @default.
- W4386003331 hasPublicationYear "2023" @default.
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