Matches in SemOpenAlex for { <https://semopenalex.org/work/W4386989073> ?p ?o ?g. }
- W4386989073 abstract "Lettuce (Lactuca sativa L.) is a leafy vegetable crop with ongoing breeding efforts related to quality, resilience, and innovative production systems. To breed resilient and resistant lettuce in the future, valuable genetic variation found in close relatives could be further exploited. Lactuca virosa (2x=2n=18), a wild relative assigned to the tertiary lettuce gene pool, has a much larger genome (3.7 Gbp) than Lactuca sativa (2.5 Gbp). It has been used in interspecific crosses and is a donor to modern crisphead lettuce cultivars. Here, we present a de novo reference assembly of L. virosa with high continuity and complete gene space. This assembly facilitated comparisons to the genome of L. sativa and to that of the wild species L. saligna, a representative of the secondary lettuce gene pool. To assess the diversity in gene content, we classified the genes of the three Lactuca species as core, accessory and unique. In addition, we identified three interspecific chromosomal inversions compared to L. sativa, which each may cause recombination suppression and thus hamper future introgression breeding. Using three-way comparisons in both reference-based and reference-free manners, we show that the proliferation of long-terminal repeat elements has driven the genome expansion of L. virosa. Further, we performed a genome-wide comparison of immune genes, nucleotide-binding leucine-rich repeat, and receptor-like kinases among Lactuca spp. and indicate the evolutionary patterns and mechanisms behind their expansions. These genome analyses greatly facilitate the understanding of genetic variation in L. virosa, which is beneficial for the breeding of improved lettuce varieties." @default.
- W4386989073 created "2023-09-24" @default.
- W4386989073 creator A5005912424 @default.
- W4386989073 creator A5009570883 @default.
- W4386989073 creator A5011035892 @default.
- W4386989073 creator A5011273036 @default.
- W4386989073 creator A5016406116 @default.
- W4386989073 creator A5017632047 @default.
- W4386989073 creator A5018164149 @default.
- W4386989073 creator A5027977735 @default.
- W4386989073 creator A5036083061 @default.
- W4386989073 creator A5053056476 @default.
- W4386989073 creator A5057923552 @default.
- W4386989073 creator A5072126755 @default.
- W4386989073 date "2023-09-23" @default.
- W4386989073 modified "2023-10-09" @default.
- W4386989073 title "Genome assembly and analysis of <i>Lactuca virosa</i>: implications for lettuce breeding" @default.
- W4386989073 cites W1482190741 @default.
- W4386989073 cites W1489349053 @default.
- W4386989073 cites W1549523938 @default.
- W4386989073 cites W16136906 @default.
- W4386989073 cites W1895577583 @default.
- W4386989073 cites W1937793059 @default.
- W4386989073 cites W1972600294 @default.
- W4386989073 cites W1982855075 @default.
- W4386989073 cites W2020134788 @default.
- W4386989073 cites W2022366078 @default.
- W4386989073 cites W2035618305 @default.
- W4386989073 cites W2045204781 @default.
- W4386989073 cites W2067059673 @default.
- W4386989073 cites W2096128575 @default.
- W4386989073 cites W2099753867 @default.
- W4386989073 cites W2101844654 @default.
- W4386989073 cites W2102278945 @default.
- W4386989073 cites W2104005232 @default.
- W4386989073 cites W2105317322 @default.
- W4386989073 cites W2111647009 @default.
- W4386989073 cites W2114179812 @default.
- W4386989073 cites W2115888213 @default.
- W4386989073 cites W2117709367 @default.
- W4386989073 cites W2119451273 @default.
- W4386989073 cites W2124799197 @default.
- W4386989073 cites W2131271579 @default.
- W4386989073 cites W2134783286 @default.
- W4386989073 cites W2135621733 @default.
- W4386989073 cites W2142785964 @default.
- W4386989073 cites W2152770371 @default.
- W4386989073 cites W2169456326 @default.
- W4386989073 cites W2190900687 @default.
- W4386989073 cites W2216234219 @default.
- W4386989073 cites W2226299262 @default.
- W4386989073 cites W2291937895 @default.
- W4386989073 cites W2422436541 @default.
- W4386989073 cites W2515694438 @default.
- W4386989073 cites W2561864307 @default.
- W4386989073 cites W2607205892 @default.
- W4386989073 cites W2782327081 @default.
- W4386989073 cites W2782908004 @default.
- W4386989073 cites W2789843538 @default.
- W4386989073 cites W2809804451 @default.
- W4386989073 cites W2898402099 @default.
- W4386989073 cites W2903125175 @default.
- W4386989073 cites W2920529045 @default.
- W4386989073 cites W2950354111 @default.
- W4386989073 cites W2950559019 @default.
- W4386989073 cites W2952136406 @default.
- W4386989073 cites W2991239467 @default.
- W4386989073 cites W2994865123 @default.
- W4386989073 cites W3004227146 @default.
- W4386989073 cites W3010315157 @default.
- W4386989073 cites W3012094285 @default.
- W4386989073 cites W3017049640 @default.
- W4386989073 cites W3093898018 @default.
- W4386989073 cites W3154657725 @default.
- W4386989073 cites W3156458251 @default.
- W4386989073 cites W3184665837 @default.
- W4386989073 cites W3186309583 @default.
- W4386989073 cites W3191005119 @default.
- W4386989073 cites W3216233964 @default.
- W4386989073 cites W4200291620 @default.
- W4386989073 cites W4224020946 @default.
- W4386989073 cites W4231788402 @default.
- W4386989073 cites W4286499349 @default.
- W4386989073 cites W4290861590 @default.
- W4386989073 cites W4294216483 @default.
- W4386989073 cites W4361285427 @default.
- W4386989073 doi "https://doi.org/10.1093/g3journal/jkad204" @default.
- W4386989073 hasPubMedId "https://pubmed.ncbi.nlm.nih.gov/37740775" @default.
- W4386989073 hasPublicationYear "2023" @default.
- W4386989073 type Work @default.
- W4386989073 citedByCount "0" @default.
- W4386989073 crossrefType "journal-article" @default.
- W4386989073 hasAuthorship W4386989073A5005912424 @default.
- W4386989073 hasAuthorship W4386989073A5009570883 @default.
- W4386989073 hasAuthorship W4386989073A5011035892 @default.
- W4386989073 hasAuthorship W4386989073A5011273036 @default.
- W4386989073 hasAuthorship W4386989073A5016406116 @default.
- W4386989073 hasAuthorship W4386989073A5017632047 @default.
- W4386989073 hasAuthorship W4386989073A5018164149 @default.
- W4386989073 hasAuthorship W4386989073A5027977735 @default.