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- W596061837 abstract "Objective To clone and characterize EgPDZ,which is similar to the PSD-95,Dlg,and ZO-1(PDZ) domains,from Echinococcus granulosus(Eg) protoscolices and analyze EgPDZ using bioinformatics.Methods Specific primers for EgPDZ were designed and the EgPDZ gene was amplified by RT-PCR from Eg protoscolex RNA.Then,EgPDZ gene fragments were cloned into a pMD18-T vector for sequencing and analysis using bioinformatics.Results The PCR products of EgPDZ were about 600 bp and were identified as a new gene by sequence analysis.This gene,designated EgPDZ,had a length of 627 bp and encodes 208 amino acid with a PI of 4.76.SMART analysis predicted that amino acids 16 to 88 of the EgPDZ protein represent a PDZ domain.Bioinformatics indicated that the EgPDZ sequence has 97.60% homology with EmPDZ and 18.16%-26.42% homology with the PDZ genes of other species such as schistosomes and human beings.However,the PDZ domain sequence of EgPDZ gene has a higher homology with that of other species of about 42.47%-98.63%.Phylogenetic analysis showed that EgPDZ was clustered with EmPDZ and had a lower homology with the PDZ genes of other species.Conclusion A new EgPDZ gene was cloned from protoscolices of Eg,providing a foundation for further study of the role of EgPDZ in host-Eg interaction." @default.
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- W596061837 date "2010-01-01" @default.
- W596061837 modified "2023-09-27" @default.
- W596061837 title "Molecular cloning and characterization of PDZ homologues from Echinococcus granulosus in Xinjiang, China." @default.
- W596061837 hasPublicationYear "2010" @default.
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