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- W795428211 abstract "Objectives: Major differences are expected in the pathways and enzymes involved in the degradation of unsaturated‐LCFA. In this work we used proteogenomic approach to study these differences. Methods: A draft genome of S. zehnderi was obtained by Illumina HiSeq sequencing. Genomes of S. zehnderi and S. wolfei (available at NCBI) were compared. S. zehnderi and M. formicicum co‐cultures grown on oleate (unsaturated LCFA, C18:1) and on stearate (saturated LCFA, C18:0) were further studied using a proteomics approach. Conclusions: Genomic comparison of S. zehnderi and S. wolfei revealed approximately 900 different proteins and 1200 common proteins. In the genome of S. zehnderi, two replicates of the unsaturated acyl‐CoA dehydrogenase genes were identified, one of which differs considerably from the acyl‐CoA gene found in S. wolfei. Proteomic analysis of S. zehnderi and M. formicium co‐cultures revealed high expression levels of proteins related to the β‐oxidation of LCFA (up to 30% of total proteins identified). Different protein expression levels were observed during the degradation of oleate (44% unique proteins) and stearate (23% unique proteins). In addition, proteins involved in electron transfer were highly expressed, including electron transfer flavoproteins, ATP synthases and a number of hydrogenases and formate dehydrogenases." @default.
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- W795428211 date "2015-06-07" @default.
- W795428211 modified "2023-09-27" @default.
- W795428211 title "Proteomics of Syntrophomonas zehnderi and Methanobacterium formicicum growing on long-chain fatty acids" @default.
- W795428211 hasPublicationYear "2015" @default.
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