Matches in SemOpenAlex for { <https://semopenalex.org/work/W8259021> ?p ?o ?g. }
Showing items 1 to 61 of
61
with 100 items per page.
- W8259021 abstract "Abstract As high-throughput transcriptome sequencing provides evidence for novel transcripts in many species, there is a renewed need for accurate methods to classify small genomic regions as protein-coding or non-coding. We present PhyloCSF, a novel comparative genomics method that analyzes a multi-species nucleotide sequence alignment to determine whether it is likely to represent a conserved protein-coding region, based on a formal statistical comparison of phylogenetic codon models. We show that PhyloCSF's classification performance in 12-species Drosophila genome alignments exceeds all other methods we compared in a previous study, and we provide a software implementation for use by the community. We anticipate that this method will be widely applicable as the transcriptomes of many additional species, tissues, and subcellular compartments are sequenced, particularly in the context of ENCODE and modENCODE." @default.
- W8259021 created "2016-06-24" @default.
- W8259021 creator A5066586114 @default.
- W8259021 creator A5089977648 @default.
- W8259021 creator A5091262431 @default.
- W8259021 date "2010-08-18" @default.
- W8259021 modified "2023-10-16" @default.
- W8259021 title "PhyloCSF: a comparative genomics method to distinguish protein-coding and non-coding regions" @default.
- W8259021 doi "https://doi.org/10.1038/npre.2010.4784.1" @default.
- W8259021 hasPublicationYear "2010" @default.
- W8259021 type Work @default.
- W8259021 sameAs 8259021 @default.
- W8259021 citedByCount "1" @default.
- W8259021 crossrefType "journal-article" @default.
- W8259021 hasAuthorship W8259021A5066586114 @default.
- W8259021 hasAuthorship W8259021A5089977648 @default.
- W8259021 hasAuthorship W8259021A5091262431 @default.
- W8259021 hasBestOaLocation W82590211 @default.
- W8259021 hasConcept C104317684 @default.
- W8259021 hasConcept C105176652 @default.
- W8259021 hasConcept C141231307 @default.
- W8259021 hasConcept C150194340 @default.
- W8259021 hasConcept C162317418 @default.
- W8259021 hasConcept C189206191 @default.
- W8259021 hasConcept C193252679 @default.
- W8259021 hasConcept C54355233 @default.
- W8259021 hasConcept C66746571 @default.
- W8259021 hasConcept C70721500 @default.
- W8259021 hasConcept C86803240 @default.
- W8259021 hasConcept C91779695 @default.
- W8259021 hasConceptScore W8259021C104317684 @default.
- W8259021 hasConceptScore W8259021C105176652 @default.
- W8259021 hasConceptScore W8259021C141231307 @default.
- W8259021 hasConceptScore W8259021C150194340 @default.
- W8259021 hasConceptScore W8259021C162317418 @default.
- W8259021 hasConceptScore W8259021C189206191 @default.
- W8259021 hasConceptScore W8259021C193252679 @default.
- W8259021 hasConceptScore W8259021C54355233 @default.
- W8259021 hasConceptScore W8259021C66746571 @default.
- W8259021 hasConceptScore W8259021C70721500 @default.
- W8259021 hasConceptScore W8259021C86803240 @default.
- W8259021 hasConceptScore W8259021C91779695 @default.
- W8259021 hasLocation W82590211 @default.
- W8259021 hasLocation W82590212 @default.
- W8259021 hasLocation W82590213 @default.
- W8259021 hasOpenAccess W8259021 @default.
- W8259021 hasPrimaryLocation W82590211 @default.
- W8259021 hasRelatedWork W142583359 @default.
- W8259021 hasRelatedWork W1965280193 @default.
- W8259021 hasRelatedWork W2139658526 @default.
- W8259021 hasRelatedWork W2153158720 @default.
- W8259021 hasRelatedWork W2521866209 @default.
- W8259021 hasRelatedWork W2975451038 @default.
- W8259021 hasRelatedWork W3023271652 @default.
- W8259021 hasRelatedWork W3177323319 @default.
- W8259021 hasRelatedWork W8259021 @default.
- W8259021 hasRelatedWork W2187207551 @default.
- W8259021 isParatext "false" @default.
- W8259021 isRetracted "false" @default.
- W8259021 magId "8259021" @default.
- W8259021 workType "article" @default.