Matches in SemOpenAlex for { <https://semopenalex.org/work/W920360596> ?p ?o ?g. }
Showing items 1 to 83 of
83
with 100 items per page.
- W920360596 endingPage "124" @default.
- W920360596 startingPage "118" @default.
- W920360596 abstract "A total of 38.0 Mb of publicly available DNA sequence in Neurospora crassa was researched for mono- to hexanucleotide simple sequence repeats (SSR or microsatellite) to determine the type, size and frequency. A total of 14 788 SSRs were observed in the whole genomic DNA sequence, about one every 2.57 kb, with the criteria of SSR length ＞15 bp and 80%matches. The most abundant microsatellite was trinucleotide repeat, the number was 4 729, followed by hexanucleotide and mononucleotide repeats, the numbers were 2 940 and 2 489 respectively, and the least abundance was dinucleotide repeat, only 691 were found. Among the 10 082 ORFs, 4 094 SSRs were harbored in 2 373 ORF (no intron) of the organism.One thousand and fifty six ORFs harbored only one SSR. Similar with other organisms, tri- and hexanucleotide repeats were predominant in ORFs, 54.1 and 48.8% oftri- and hexanucleotide repeats were distributed in ORF region. The density of these two motifs was overpresented in coding regions, because ORF region and coding region constitutes only 46 and 38.3% of genomic sequence, respectively. Upstream and downstream 300 bp of regulatory regions were high density regions of SSRs, particularly density of pentanucleotide SSR in upstream region was as high as five times of average density in genomic DNA, density of di- and tetranucleotide SSR was also more than two times of average density. The density of penta-, tetra-, di- and mononucleotide SSRs was relatively higher than average density. There were 47 SSRs in mitochondria 64 840 bp DNA sequence, their distribution is similar with genomic DNA sequence. These results suggested that SSRs were clustered in regulatory regions of genomic DNA." @default.
- W920360596 created "2016-06-24" @default.
- W920360596 creator A5004234824 @default.
- W920360596 creator A5019357061 @default.
- W920360596 creator A5025029267 @default.
- W920360596 creator A5075103881 @default.
- W920360596 creator A5080064557 @default.
- W920360596 date "2005-01-01" @default.
- W920360596 modified "2023-09-27" @default.
- W920360596 title "Frequency and Distribution of Microsatellites in the Genome of Filamentous Fungus, Neurospora crassa" @default.
- W920360596 hasPublicationYear "2005" @default.
- W920360596 type Work @default.
- W920360596 sameAs 920360596 @default.
- W920360596 citedByCount "0" @default.
- W920360596 crossrefType "journal-article" @default.
- W920360596 hasAuthorship W920360596A5004234824 @default.
- W920360596 hasAuthorship W920360596A5019357061 @default.
- W920360596 hasAuthorship W920360596A5025029267 @default.
- W920360596 hasAuthorship W920360596A5075103881 @default.
- W920360596 hasAuthorship W920360596A5080064557 @default.
- W920360596 hasConcept C104317684 @default.
- W920360596 hasConcept C141231307 @default.
- W920360596 hasConcept C143065580 @default.
- W920360596 hasConcept C166252455 @default.
- W920360596 hasConcept C167625842 @default.
- W920360596 hasConcept C17757408 @default.
- W920360596 hasConcept C180754005 @default.
- W920360596 hasConcept C27149982 @default.
- W920360596 hasConcept C2776739539 @default.
- W920360596 hasConcept C2780530800 @default.
- W920360596 hasConcept C2909495079 @default.
- W920360596 hasConcept C29511175 @default.
- W920360596 hasConcept C47289529 @default.
- W920360596 hasConcept C54355233 @default.
- W920360596 hasConcept C61320498 @default.
- W920360596 hasConcept C86803240 @default.
- W920360596 hasConceptScore W920360596C104317684 @default.
- W920360596 hasConceptScore W920360596C141231307 @default.
- W920360596 hasConceptScore W920360596C143065580 @default.
- W920360596 hasConceptScore W920360596C166252455 @default.
- W920360596 hasConceptScore W920360596C167625842 @default.
- W920360596 hasConceptScore W920360596C17757408 @default.
- W920360596 hasConceptScore W920360596C180754005 @default.
- W920360596 hasConceptScore W920360596C27149982 @default.
- W920360596 hasConceptScore W920360596C2776739539 @default.
- W920360596 hasConceptScore W920360596C2780530800 @default.
- W920360596 hasConceptScore W920360596C2909495079 @default.
- W920360596 hasConceptScore W920360596C29511175 @default.
- W920360596 hasConceptScore W920360596C47289529 @default.
- W920360596 hasConceptScore W920360596C54355233 @default.
- W920360596 hasConceptScore W920360596C61320498 @default.
- W920360596 hasConceptScore W920360596C86803240 @default.
- W920360596 hasIssue "2" @default.
- W920360596 hasLocation W9203605961 @default.
- W920360596 hasOpenAccess W920360596 @default.
- W920360596 hasPrimaryLocation W9203605961 @default.
- W920360596 hasRelatedWork W1011920728 @default.
- W920360596 hasRelatedWork W1914715376 @default.
- W920360596 hasRelatedWork W1977142328 @default.
- W920360596 hasRelatedWork W2079247112 @default.
- W920360596 hasRelatedWork W2100476087 @default.
- W920360596 hasRelatedWork W2137196753 @default.
- W920360596 hasRelatedWork W2148175554 @default.
- W920360596 hasRelatedWork W2189381471 @default.
- W920360596 hasRelatedWork W2351262602 @default.
- W920360596 hasRelatedWork W2366151326 @default.
- W920360596 hasRelatedWork W2366610164 @default.
- W920360596 hasRelatedWork W2368501897 @default.
- W920360596 hasRelatedWork W2430629970 @default.
- W920360596 hasRelatedWork W2540784563 @default.
- W920360596 hasRelatedWork W2556723500 @default.
- W920360596 hasRelatedWork W2791250801 @default.
- W920360596 hasRelatedWork W3010715009 @default.
- W920360596 hasRelatedWork W619205759 @default.
- W920360596 hasRelatedWork W953620380 @default.
- W920360596 hasRelatedWork W2183047492 @default.
- W920360596 hasVolume "4" @default.
- W920360596 isParatext "false" @default.
- W920360596 isRetracted "false" @default.
- W920360596 magId "920360596" @default.
- W920360596 workType "article" @default.