Matches in Ubergraph for { <http://purl.obolibrary.org/obo/SO_0000727> ?p ?o ?g. }
Showing items 1 to 59 of
59
with 100 items per page.
- SO_0000727 IAO_0000115 "A regulatory region where transcription factor binding sites are clustered to regulate various aspects of transcription activities. (CRMs can be located a few kb to hundreds of kb upstream of the core promoter, in the coding sequence, within introns, or in the untranslated regions (UTR) sequences, and even on a different chromosome). A single gene can be regulated by multiple CRMs to give precise control of its spatial and temporal expression. CRMs function as nodes in large, intertwined regulatory network. CRM DNA accessibility is subject to regulation by dbTFs and transcription co-TFs." @default.
- SO_0000727 member_of BFO_0000001 @default.
- SO_0000727 member_of BFO_0000002 @default.
- SO_0000727 member_of BFO_0000004 @default.
- SO_0000727 member_of BFO_0000040 @default.
- SO_0000727 member_of COB_0000006 @default.
- SO_0000727 member_of SO_0000001 @default.
- SO_0000727 member_of SO_0000110 @default.
- SO_0000727 member_of SO_0000704 @default.
- SO_0000727 member_of SO_0001411 @default.
- SO_0000727 member_of SO_0005855 @default.
- SO_0000727 part_of BFO_0000001 @default.
- SO_0000727 part_of BFO_0000002 @default.
- SO_0000727 part_of BFO_0000004 @default.
- SO_0000727 part_of BFO_0000040 @default.
- SO_0000727 part_of COB_0000006 @default.
- SO_0000727 part_of SO_0000001 @default.
- SO_0000727 part_of SO_0000110 @default.
- SO_0000727 part_of SO_0000704 @default.
- SO_0000727 part_of SO_0001411 @default.
- SO_0000727 part_of SO_0005855 @default.
- SO_0000727 normalizedInformationContent "75.267234140859458" @default.
- SO_0000727 referenceCount "42" @default.
- SO_0000727 hasExactSynonym "CRM" @default.
- SO_0000727 hasExactSynonym "TF module" @default.
- SO_0000727 hasExactSynonym "cis regulatory module" @default.
- SO_0000727 hasExactSynonym "transcription factor module" @default.
- SO_0000727 hasOBONamespace "sequence" @default.
- SO_0000727 id "SO:0000727" @default.
- SO_0000727 inSubset SOFA @default.
- SO_0000727 type Class @default.
- SO_0000727 comment "Requested by Stephen Grossmann Dec 2004. Changed relationship from has_part SO:0000235 TF_binding site to TF_binding_site is part_of SO:0000727 CRM in response to requests from GREEKC initiative in Aug 2020. Removed 3' from definition because 5' UTRs are included as well, notified by Colin Logie of GREEKC. Nov 9 2020. DS Updated name from 'CRM' to 'cis_regulatory_module' on 08 Feb 2021. See GitHub Issue #526. DS Added final sentence to definition as part of GREEKC Feb 16, 2021. See GitHub Issue #534." @default.
- SO_0000727 isDefinedBy so.owl @default.
- SO_0000727 label "cis_regulatory_module" @default.
- SO_0000727 subClassOf BFO_0000001 @default.
- SO_0000727 subClassOf BFO_0000002 @default.
- SO_0000727 subClassOf BFO_0000004 @default.
- SO_0000727 subClassOf BFO_0000040 @default.
- SO_0000727 subClassOf COB_0000006 @default.
- SO_0000727 subClassOf SO_0000001 @default.
- SO_0000727 subClassOf SO_0000110 @default.
- SO_0000727 subClassOf SO_0000727 @default.
- SO_0000727 subClassOf SO_0000831 @default.
- SO_0000727 subClassOf SO_0001055 @default.
- SO_0000727 subClassOf SO_0001411 @default.
- SO_0000727 subClassOf SO_0005836 @default.
- SO_0000727 category ChemicalEntity @default.
- SO_0000727 category ChemicalEntityOrGeneOrGeneProduct @default.
- SO_0000727 category ChemicalEntityOrProteinOrPolypeptide @default.
- SO_0000727 category ChemicalOrDrugOrTreatment @default.
- SO_0000727 category Entity @default.
- SO_0000727 category GenomicEntity @default.
- SO_0000727 category MolecularEntity @default.
- SO_0000727 category NamedThing @default.
- SO_0000727 category NucleicAcidEntity @default.
- SO_0000727 category OntologyClass @default.
- SO_0000727 category PhysicalEssence @default.
- SO_0000727 category PhysicalEssenceOrOccurrent @default.
- SO_0000727 category ThingWithTaxon @default.