Matches in Ubergraph for { <http://purl.obolibrary.org/obo/SO_0002378> ?p ?o ?g. }
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- SO_0002378 IAO_0000115 "A gene that codes for U3_snoRNA. U3 snoRNA is a member of the box C/D class of small nucleolar RNAs. The U3 snoRNA secondary structure is characterised by a small 5' domain (with boxes A and A'), and a larger 3' domain (with boxes B, C, C', and D), the two domains being linked by a single-stranded hinge. Boxes B and C form the B/C motif, which appears to be exclusive to U3 snoRNAs, and boxes C' and D form the C'/D motif. The latter is functionally similar to the C/D motifs found in other snoRNAs. The 5' domain and the hinge region act as a pre-rRNA-binding domain. The 3' domain has conserved protein-binding sites. Both the box B/C and box C'/D motifs are sufficient for nuclear retention of U3 snoRNA. The box C'/D motif is also necessary for nucleolar localization, stability and hypermethylation of U3 snoRNA. Both box B/C and C'/D motifs are involved in specific protein interactions and are necessary for the rRNA processing functions of U3 snoRNA." @default.
- SO_0002378 has_quality BFO_0000001 @default.
- SO_0002378 has_quality BFO_0000002 @default.
- SO_0002378 has_quality BFO_0000020 @default.
- SO_0002378 has_quality COB_0000502 @default.
- SO_0002378 has_quality PATO_0000001 @default.
- SO_0002378 has_quality SO_0000011 @default.
- SO_0002378 has_quality SO_0000400 @default.
- SO_0002378 has_quality SO_0000401 @default.
- SO_0002378 has_quality SO_0000578 @default.
- SO_0002378 has_quality SO_0000733 @default.
- SO_0002378 member_of BFO_0000001 @default.
- SO_0002378 member_of BFO_0000002 @default.
- SO_0002378 member_of BFO_0000004 @default.
- SO_0002378 member_of BFO_0000040 @default.
- SO_0002378 member_of COB_0000006 @default.
- SO_0002378 member_of SO_0000001 @default.
- SO_0002378 member_of SO_0000110 @default.
- SO_0002378 member_of SO_0001411 @default.
- SO_0002378 member_of SO_0005855 @default.
- SO_0002378 part_of BFO_0000001 @default.
- SO_0002378 part_of BFO_0000002 @default.
- SO_0002378 part_of BFO_0000004 @default.
- SO_0002378 part_of BFO_0000040 @default.
- SO_0002378 part_of COB_0000006 @default.
- SO_0002378 part_of SO_0000001 @default.
- SO_0002378 part_of SO_0000110 @default.
- SO_0002378 part_of SO_0001411 @default.
- SO_0002378 part_of SO_0005855 @default.
- SO_0002378 normalizedInformationContent "100" @default.
- SO_0002378 referenceCount "1" @default.
- SO_0002378 created_by "evan" @default.
- SO_0002378 creation_date "2021-11-19T05:50:57Z" @default.
- SO_0002378 hasExactSynonym "small nucleolar RNA U3 gene, snoRNA U3 gene, U3 small nucleolar RNA gene, U3 snoRNA gene" @default.
- SO_0002378 hasOBONamespace "sequence" @default.
- SO_0002378 id "SO:0002378" @default.
- SO_0002378 type Class @default.
- SO_0002378 comment "Added at the request of Steven Marygold. See GitHub Issue #519 (https://github.com/The-Sequence-Ontology/SO-Ontologies/issues/519)." @default.
- SO_0002378 isDefinedBy so.owl @default.
- SO_0002378 label "U3_snoRNA_gene" @default.
- SO_0002378 subClassOf BFO_0000001 @default.
- SO_0002378 subClassOf BFO_0000002 @default.
- SO_0002378 subClassOf BFO_0000004 @default.
- SO_0002378 subClassOf BFO_0000040 @default.
- SO_0002378 subClassOf COB_0000006 @default.
- SO_0002378 subClassOf SO_0000001 @default.
- SO_0002378 subClassOf SO_0000110 @default.
- SO_0002378 subClassOf SO_0000704 @default.
- SO_0002378 subClassOf SO_0001263 @default.
- SO_0002378 subClassOf SO_0001267 @default.
- SO_0002378 subClassOf SO_0001411 @default.
- SO_0002378 subClassOf SO_0002342 @default.
- SO_0002378 subClassOf SO_0002375 @default.
- SO_0002378 subClassOf SO_0002378 @default.
- SO_0002378 category BiologicalEntity @default.
- SO_0002378 category ChemicalEntity @default.
- SO_0002378 category ChemicalEntityOrGeneOrGeneProduct @default.
- SO_0002378 category ChemicalEntityOrProteinOrPolypeptide @default.
- SO_0002378 category ChemicalOrDrugOrTreatment @default.
- SO_0002378 category Entity @default.
- SO_0002378 category Gene @default.
- SO_0002378 category GeneOrGeneProduct @default.
- SO_0002378 category GenomicEntity @default.
- SO_0002378 category MacromolecularMachineMixin @default.
- SO_0002378 category MolecularEntity @default.
- SO_0002378 category NamedThing @default.
- SO_0002378 category NucleicAcidEntity @default.
- SO_0002378 category OntologyClass @default.
- SO_0002378 category PhysicalEssence @default.
- SO_0002378 category PhysicalEssenceOrOccurrent @default.
- SO_0002378 category ThingWithTaxon @default.