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- CS201912131_128 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_128 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_128 cell_set_aligned_alias "Lamp5" @default.
- CS201912131_128 cell_set_label "RNAseq 001-008, 014-015" @default.
- CS201912131_128 cell_set_preferred_alias "(Mouse Lamp5)-like" @default.
- CS201912131_128 node_metadata "{"cell_set_preferred_alias": "(Mouse Lamp5)-like", "cell_set_label": "RNAseq 001-008, 014-015", "cell_set_accession": "CS201912131_128", "cell_set_aligned_alias": "Lamp5", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_1|CS201912131_2|CS201912131_3|CS201912131_4|CS201912131_5|CS201912131_6|CS201912131_7|CS201912131_8|CS201912131_14|CS201912131_15", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#DA808C"}" @default.
- CS201912131_128 PCL_0010051 "Subclass" @default.
- CS201912131_128 PCL_0010059 "CS201912131_128" @default.
- CS201912131_128 RO_0015003 CS201912131_143 @default.
- CS201912131_128 hasExactSynonym "Lamp5" @default.
- CS201912131_128 hasRelatedSynonym "Lamp5" @default.
- CS201912131_128 type B89568354968422f50a2abd67057f83f9 @default.
- CS201912131_128 type Bd1445a64f4a7967987f56fa4fbc89fb2 @default.
- CS201912131_128 type PCL_0010001 @default.
- CS201912131_128 type NamedIndividual @default.
- CS201912131_128 comment "Lamp5 is: CGE/PoA-derived GABAergic subclass typically expressing Lamp5. In Human primary motor cortex (CCN201912131), Lamp5 has 10 child types: Inh L1 LAMP5 PVRL2, Inh L1 LAMP5 RAB11FIP1, Inh L1-6 LAMP5 AARD, Inh L1-6 LAMP5 NES, Inh L1-6 LAMP5 CA1, Inh L5-6 LAMP5 CRABP1, Inh L3-6 PAX6 LINC01497, Inh L1 PAX6 MIR101-1, Inh L1 LAMP5 BMP2 and Inh L1 LAMP5 NMBR. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is EYA4 and MYO16 (F-beta = 0.911), based on the NS Forest method of marker gene selection. Lamp5 cells represent 19.68% of all GABAergic cells collected in the Human M1 10Xv3 dataset. Lamp5 cells have an average of 4758 genes detected, which is 80 more than the average for all GABAergic cells (4678)." @default.
- CS201912131_128 isDefinedBy cs201912131.owl @default.
- CS201912131_128 label "RNAseq 001-008, 014-015 - CS201912131_128" @default.
- CS201912131_128 prefLabel "(Mouse Lamp5)-like" @default.