Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912131_129> ?p ?o ?g. }
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- CS201912131_129 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_129 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_129 cell_set_aligned_alias "Sncg" @default.
- CS201912131_129 cell_set_label "RNAseq 009-013, 016-018" @default.
- CS201912131_129 cell_set_preferred_alias "(Mouse Sncg)-like" @default.
- CS201912131_129 node_metadata "{"cell_set_preferred_alias": "(Mouse Sncg)-like", "cell_set_label": "RNAseq 009-013, 016-018", "cell_set_accession": "CS201912131_129", "cell_set_aligned_alias": "Sncg", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_9|CS201912131_10|CS201912131_11|CS201912131_12|CS201912131_13|CS201912131_16|CS201912131_17|CS201912131_18", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#D633FF"}" @default.
- CS201912131_129 PCL_0010051 "Subclass" @default.
- CS201912131_129 PCL_0010059 "CS201912131_129" @default.
- CS201912131_129 RO_0015003 CS201912131_190 @default.
- CS201912131_129 hasExactSynonym "Sncg" @default.
- CS201912131_129 hasRelatedSynonym "Sncg" @default.
- CS201912131_129 type Bcc2537970aecc42c76de4fd00e2c2e0d @default.
- CS201912131_129 type Bdc5fe20c902c9230a5c62d5bed4f14be @default.
- CS201912131_129 type PCL_0010001 @default.
- CS201912131_129 type NamedIndividual @default.
- CS201912131_129 comment "Sncg is: CGE/PoA-derived GABAergic subclass typically expressing Sncg in mouse. In Human primary motor cortex (CCN201912131), Sncg has 8 child types: Inh L1 PAX6 CHRFAM7A, Inh L1-6 VIP SLC7A6OS, Inh L2 PAX6 FREM2, Inh L1-2 VIP HTR3A, Inh L1-2 VIP WNT4, Inh L1 PVALB SST ASIC4, Inh L1 SST P4HA3 and Inh L1 SST DEFB108B. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is ADARB2 and CNR1 and CXCL14 (F-beta = 0.653), based on the NS Forest method of marker gene selection. Sncg cells represent 3.95% of all GABAergic cells collected in the Human M1 10Xv3 dataset. Sncg cells have an average of 4254 genes detected, which is 424 less than the average for all GABAergic cells (4678)." @default.
- CS201912131_129 isDefinedBy cs201912131.owl @default.
- CS201912131_129 label "RNAseq 009-013, 016-018 - CS201912131_129" @default.
- CS201912131_129 prefLabel "(Mouse Sncg)-like" @default.