Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912131_130> ?p ?o ?g. }
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- CS201912131_130 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_130 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_130 cell_set_aligned_alias "Vip" @default.
- CS201912131_130 cell_set_label "RNAseq 019-039" @default.
- CS201912131_130 cell_set_preferred_alias "(Mouse Vip)-like" @default.
- CS201912131_130 node_metadata "{"cell_set_preferred_alias": "(Mouse Vip)-like", "cell_set_label": "RNAseq 019-039", "cell_set_accession": "CS201912131_130", "cell_set_aligned_alias": "Vip", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_19|CS201912131_20|CS201912131_21|CS201912131_22|CS201912131_23|CS201912131_24|CS201912131_25|CS201912131_26|CS201912131_27|CS201912131_28|CS201912131_29|CS201912131_30|CS201912131_31|CS201912131_32|CS201912131_33|CS201912131_34|CS201912131_35|CS201912131_36|CS201912131_37|CS201912131_38|CS201912131_39", "cell_type_card": "Subclass", "original_label": "n24", "cell_set_color": "#B864CC"}" @default.
- CS201912131_130 original_label "n24" @default.
- CS201912131_130 PCL_0010051 "Subclass" @default.
- CS201912131_130 PCL_0010059 "CS201912131_130" @default.
- CS201912131_130 RO_0015003 CS201912131_189 @default.
- CS201912131_130 hasExactSynonym "Vip" @default.
- CS201912131_130 hasRelatedSynonym "Vip" @default.
- CS201912131_130 type B63f56cd19900825180e774155f0ee051 @default.
- CS201912131_130 type Bcadbabda88e3a30288f4eff2e02614f5 @default.
- CS201912131_130 type PCL_0010001 @default.
- CS201912131_130 type NamedIndividual @default.
- CS201912131_130 comment "Vip is: CGE/PoA-derived GABAergic subclass typically expressing Vip. In Human primary motor cortex (CCN201912131), Vip has 21 child types: Inh L1-3 VIP CBLN1, Inh L1-2 VIP EXPH5, Inh L1-3 VIP HSPB6, Inh L1-2 VIP PTGER3, Inh L1-2 VIP SCML4, Inh L1-3 VIP FNDC1, Inh L1-3 VIP CHRNA2, Inh L2 VIP SLC6A16, Inh L1 VIP KLHDC8B, Inh L3-5 VIP IGDCC3, Inh L1-5 VIP SMOC1, Inh L3-5 VIP HS3ST3A1, Inh L5-6 VIP COL4A3, Inh L1-5 VIP CD27-AS1, Inh L2-5 VIP BSPRY, Inh L2-5 VIP SOX11, Inh L3-6 VIP ZIM2-AS1, Inh L1-5 VIP PHLDB3, Inh L1-5 VIP LINC01013, Inh L3-6 VIP UG0898H09 and Inh L3-5 VIP TAC3. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is VIP (F-beta = 0.886), based on the NS Forest method of marker gene selection. Vip cells represent 21.46% of all GABAergic cells collected in the Human M1 10Xv3 dataset. Vip cells have an average of 4248 genes detected, which is 430 less than the average for all GABAergic cells (4678)." @default.
- CS201912131_130 isDefinedBy cs201912131.owl @default.
- CS201912131_130 label "RNAseq 019-039 - CS201912131_130" @default.
- CS201912131_130 prefLabel "(Mouse Vip)-like" @default.