Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912131_131> ?p ?o ?g. }
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- CS201912131_131 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_131 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_131 cell_set_aligned_alias "Sst" @default.
- CS201912131_131 cell_set_label "RNAseq 041-058" @default.
- CS201912131_131 cell_set_preferred_alias "(Mouse Sst)-like" @default.
- CS201912131_131 node_metadata "{"cell_set_preferred_alias": "(Mouse Sst)-like", "cell_set_label": "RNAseq 041-058", "cell_set_accession": "CS201912131_131", "cell_set_aligned_alias": "Sst", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_41|CS201912131_42|CS201912131_43|CS201912131_44|CS201912131_45|CS201912131_46|CS201912131_47|CS201912131_48|CS201912131_49|CS201912131_50|CS201912131_51|CS201912131_52|CS201912131_53|CS201912131_54|CS201912131_55|CS201912131_56|CS201912131_57|CS201912131_58", "cell_type_card": "Subclass", "original_label": "n46", "cell_set_color": "#FF9900"}" @default.
- CS201912131_131 original_label "n46" @default.
- CS201912131_131 PCL_0010051 "Subclass" @default.
- CS201912131_131 PCL_0010059 "CS201912131_131" @default.
- CS201912131_131 RO_0015003 CS201912131_215 @default.
- CS201912131_131 hasExactSynonym "Sst" @default.
- CS201912131_131 hasRelatedSynonym "Sst" @default.
- CS201912131_131 type B663bf690112c230661ff960b251f3577 @default.
- CS201912131_131 type Bfce477a5d50b744e283e0b285102a10a @default.
- CS201912131_131 type PCL_0010001 @default.
- CS201912131_131 type NamedIndividual @default.
- CS201912131_131 comment "Sst is: MGE-derived GABAergic subclass typically expressing Sst. In Human primary motor cortex (CCN201912131), Sst has 18 child types: Inh L3-5 SST CDH3, Inh L5 SST RPL35AP11, Inh L5-6 SST ISX, Inh L5-6 PVALB SST CRHR2, Inh L3-5 SST OR5AH1P, Inh L3-5 SST GGTLC3, Inh L2-3 SST NMU, Inh L5-6 SST PAWR, Inh L5-6 SST PIK3CD, Inh L1-2 SST CCNJL, Inh L1-3 SST FAM20A, Inh L1-2 SST PRRT4, Inh L5-6 SST BEAN1, Inh L5-6 SST DNAJC14, Inh L5-6 SST C4orf26, Inh L5-6 SST FBN2, Inh L5-6 SST KLHL1 and Inh L6 SST TH. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is NXPH1 and SOX6 and SST (F-beta = 0.888), based on the NS Forest method of marker gene selection. Sst cells represent 26.22% of all GABAergic cells collected in the Human M1 10Xv3 dataset. Sst cells have an average of 3925 genes detected, which is 753 less than the average for all GABAergic cells (4678)." @default.
- CS201912131_131 isDefinedBy cs201912131.owl @default.
- CS201912131_131 label "RNAseq 041-058 - CS201912131_131" @default.
- CS201912131_131 prefLabel "(Mouse Sst)-like" @default.