Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912131_132> ?p ?o ?g. }
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- CS201912131_132 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_132 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_132 cell_set_aligned_alias "Pvalb" @default.
- CS201912131_132 cell_set_label "RNAseq 059-072" @default.
- CS201912131_132 cell_set_preferred_alias "(Mouse Pvalb)-like" @default.
- CS201912131_132 node_metadata "{"cell_set_preferred_alias": "(Mouse Pvalb)-like", "cell_set_label": "RNAseq 059-072", "cell_set_accession": "CS201912131_132", "cell_set_aligned_alias": "Pvalb", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_59|CS201912131_60|CS201912131_61|CS201912131_62|CS201912131_63|CS201912131_64|CS201912131_65|CS201912131_66|CS201912131_67|CS201912131_68|CS201912131_69|CS201912131_70|CS201912131_71|CS201912131_72", "cell_type_card": "Subclass", "original_label": "n63", "cell_set_color": "#D93137"}" @default.
- CS201912131_132 original_label "n63" @default.
- CS201912131_132 PCL_0010051 "Subclass" @default.
- CS201912131_132 PCL_0010059 "CS201912131_132" @default.
- CS201912131_132 RO_0015003 CS201912131_215 @default.
- CS201912131_132 hasExactSynonym "Pvalb" @default.
- CS201912131_132 hasRelatedSynonym "Pvalb" @default.
- CS201912131_132 type B754c85225815e81e845e0893dea598eb @default.
- CS201912131_132 type Ba6718d7a48dd428c489ff75c1de39cd2 @default.
- CS201912131_132 type PCL_0010001 @default.
- CS201912131_132 type NamedIndividual @default.
- CS201912131_132 comment "Pvalb is: MGE-derived GABAergic subclass typically expressing Pvalb; includes basket and chandelier cells. In Human primary motor cortex (CCN201912131), Pvalb has 14 child types: Inh L5-6 PVALB KCNIP2, Inh L5-6 PVALB ZFPM2-AS1, Inh L3-5 PVALB ISG20, Inh L5 PVALB LRIG3, Inh L2-5 PVALB HHIPL1, Inh L2-5 PVALB RPH3AL, Inh L3 PVALB SAMD13, Inh L1-2 PVALB CDK20, Inh L2 PVALB FRZB, Inh L1-2 SST CLIC6, Inh L5-6 PVALB GAPDHP60, Inh L5-6 PVALB FAM150B, Inh L5-6 PVALB MEPE and Inh L1-6 PVALB COL15A1. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is ADAMTS17 and LOC101929680 (F-beta = 0.88), based on the NS Forest method of marker gene selection. Pvalb cells represent 34.38% of all GABAergic cells collected in the Human M1 10Xv3 dataset. Pvalb cells have an average of 5517 genes detected, which is 839 more than the average for all GABAergic cells (4678)." @default.
- CS201912131_132 isDefinedBy cs201912131.owl @default.
- CS201912131_132 label "RNAseq 059-072 - CS201912131_132" @default.
- CS201912131_132 prefLabel "(Mouse Pvalb)-like" @default.