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- CS201912131_133 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_133 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_133 cell_set_aligned_alias "L2/3 IT" @default.
- CS201912131_133 cell_set_label "RNAseq 073-080" @default.
- CS201912131_133 cell_set_preferred_alias "(Mouse L2/3 IT)-like" @default.
- CS201912131_133 node_metadata "{"cell_set_preferred_alias": "(Mouse L2/3 IT)-like", "cell_set_label": "RNAseq 073-080", "cell_set_accession": "CS201912131_133", "cell_set_aligned_alias": "L2/3 IT", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_73|CS201912131_74|CS201912131_75|CS201912131_76|CS201912131_77|CS201912131_78|CS201912131_80|CS201912131_81", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#C4EC04"}" @default.
- CS201912131_133 PCL_0010051 "Subclass" @default.
- CS201912131_133 PCL_0010059 "CS201912131_133" @default.
- CS201912131_133 RO_0015003 CS201912131_145 @default.
- CS201912131_133 hasExactSynonym "L2/3 IT" @default.
- CS201912131_133 hasRelatedSynonym "L2/3 IT" @default.
- CS201912131_133 type B699dd5b8f3809222fae165d4ff53151c @default.
- CS201912131_133 type B73922beb64703aa3cf7f3b693401653b @default.
- CS201912131_133 type PCL_0010001 @default.
- CS201912131_133 type NamedIndividual @default.
- CS201912131_133 comment "L2/3 IT is: Layer 2/3 intratelencephalic-projecting. In Human primary motor cortex (CCN201912131), L2/3 IT has 8 child types: Exc L2 LAMP5 KCNG3, Exc L2 LINC00507 ATP7B, Exc L2 LINC00507 GLRA3, Exc L2-3 RORB RTKN2, Exc L2-3 LINC00507 DSG3, Exc L3 LAMP5 CARM1P1, Exc L2-3 RORB CCDC68 and Exc L2-3 RORB PTPN3. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is CUX2 and FAM19A1 (F-beta = 0.946), based on the NS Forest method of marker gene selection. L2/3 IT cells represent 50.04% of all Glutamatergic cells collected in the Human M1 10Xv3 dataset. L2/3 IT cells have an average of 5945 genes detected, which is 197 less than the average for all Glutamatergic cells (6142)." @default.
- CS201912131_133 isDefinedBy cs201912131.owl @default.
- CS201912131_133 label "RNAseq 073-080 - CS201912131_133" @default.
- CS201912131_133 prefLabel "(Mouse L2/3 IT)-like" @default.