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- CS201912131_134 cell_set_alias_assignee "Nikolas Jorstad" @default.
- CS201912131_134 cell_set_alias_citation "PMID:34616062" @default.
- CS201912131_134 cell_set_aligned_alias "L5 IT" @default.
- CS201912131_134 cell_set_label "RNAseq 081-092" @default.
- CS201912131_134 cell_set_preferred_alias "(Mouse L5 IT)-like" @default.
- CS201912131_134 node_metadata "{"cell_set_preferred_alias": "(Mouse L5 IT)-like", "cell_set_label": "RNAseq 081-092", "cell_set_accession": "CS201912131_134", "cell_set_aligned_alias": "L5 IT", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Nikolas Jorstad", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Human", "modality": "RNAseq", "taxonomy_id": "CCN201912131", "taxonomy_description": "Human M1 transcriptomics taxonomy", "child_cell_set_accessions": "CS201912131_82|CS201912131_83|CS201912131_84|CS201912131_85|CS201912131_86|CS201912131_87|CS201912131_88|CS201912131_89|CS201912131_90|CS201912131_91|CS201912131_92|CS201912131_93", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#50B2AD"}" @default.
- CS201912131_134 PCL_0010051 "Subclass" @default.
- CS201912131_134 PCL_0010059 "CS201912131_134" @default.
- CS201912131_134 RO_0015003 CS201912131_248 @default.
- CS201912131_134 hasExactSynonym "L5 IT" @default.
- CS201912131_134 hasRelatedSynonym "L5 IT" @default.
- CS201912131_134 type Bd54d5c07b92c5db8ef9f7a7bd1909eb6 @default.
- CS201912131_134 type Be2df3b59ab414955ae4ef160bf7c28ed @default.
- CS201912131_134 type PCL_0010001 @default.
- CS201912131_134 type NamedIndividual @default.
- CS201912131_134 comment "L5 IT is: Layer 5 intratelencephalic-projecting. In Human primary motor cortex (CCN201912131), L5 IT has 12 child types: Exc L3 THEMIS ENPEP, Exc L3-5 RORB TNNT2, Exc L3-5 RORB LAMA4, Exc L5 THEMIS VILL, Exc L3 RORB OTOGL, Exc L3-5 RORB LINC01202, Exc L5 THEMIS SLC22A18, Exc L5-6 THEMIS TNFAIP6, Exc L3-5 RORB LNX2, Exc L3-5 RORB RPRM, Exc L5 RORB MED8 and Exc L5 THEMIS FGF10. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is LOC105374971 and RORB (F-beta = 0.825), based on the NS Forest method of marker gene selection. L5 IT cells represent 28.57% of all Glutamatergic cells collected in the Human M1 10Xv3 dataset. L5 IT cells have an average of 6331 genes detected, which is 189 more than the average for all Glutamatergic cells (6142)." @default.
- CS201912131_134 isDefinedBy cs201912131.owl @default.
- CS201912131_134 label "RNAseq 081-092 - CS201912131_134" @default.
- CS201912131_134 prefLabel "(Mouse L5 IT)-like" @default.