Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912132_96> ?p ?o ?g. }
Showing items 1 to 19 of
19
with 100 items per page.
- CS201912132_96 cell_set_alias_assignee "Fenna Krienen" @default.
- CS201912132_96 cell_set_alias_citation "PMID:34616062" @default.
- CS201912132_96 cell_set_aligned_alias "Sncg" @default.
- CS201912132_96 cell_set_label "RNAseq 08-14" @default.
- CS201912132_96 cell_set_preferred_alias "(Mouse Sncg)-like" @default.
- CS201912132_96 node_metadata "{"cell_set_preferred_alias": "(Mouse Sncg)-like", "cell_set_label": "RNAseq 08-14", "cell_set_accession": "CS201912132_96", "cell_set_aligned_alias": "Sncg", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Fenna Krienen", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Marmoset", "modality": "RNAseq", "taxonomy_id": "CCN201912132", "taxonomy_description": "Marmoset M1 taxonomy using 10X data", "child_cell_set_accessions": "CS201912132_8|CS201912132_9|CS201912132_10|CS201912132_11|CS201912132_12|CS201912132_13|CS201912132_14", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#D633FF"}" @default.
- CS201912132_96 PCL_0010051 "Subclass" @default.
- CS201912132_96 PCL_0010059 "CS201912132_96" @default.
- CS201912132_96 RO_0015003 CS201912132_148 @default.
- CS201912132_96 hasExactSynonym "Sncg" @default.
- CS201912132_96 hasRelatedSynonym "Sncg" @default.
- CS201912132_96 type B4a715ae7f15106e81003f15907fc5444 @default.
- CS201912132_96 type B5fa9e512185d77680ed45d295350b2d2 @default.
- CS201912132_96 type PCL_0010001 @default.
- CS201912132_96 type NamedIndividual @default.
- CS201912132_96 comment "Sncg is: CGE/PoA-derived GABAergic subclass typically expressing Sncg in mouse. In Marmoset primary motor cortex (CCN201912132), Sncg has 7 child types: Inh SNCG PLPPR1, Inh PAX6 ANKRD6, Inh VIP CYP19A1, Inh SNCG CNTN4, Inh PAX6 CDH4, Inh GAD1 PCP4 and Inh GAD1 LOC108589948. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is ADARB2 and CNR1 and LUZP2 (F-beta = 0.655), based on the NS Forest method of marker gene selection. Sncg cells represent 0.0877674163466813% of all GABAergic cells collected in the marmoset M1 10Xv3 dataset. Sncg cells have an average of 3330 genes detected, which is 222 less than the average for all GABAergic cells (3552)." @default.
- CS201912132_96 isDefinedBy cs201912132.owl @default.
- CS201912132_96 label "RNAseq 08-14 - CS201912132_96" @default.
- CS201912132_96 prefLabel "(Mouse Sncg)-like" @default.