Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912132_97> ?p ?o ?g. }
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- CS201912132_97 cell_set_alias_assignee "Fenna Krienen" @default.
- CS201912132_97 cell_set_alias_citation "PMID:34616062" @default.
- CS201912132_97 cell_set_aligned_alias "Vip" @default.
- CS201912132_97 cell_set_label "RNAseq 15-25" @default.
- CS201912132_97 cell_set_preferred_alias "(Mouse Vip)-like" @default.
- CS201912132_97 node_metadata "{"cell_set_preferred_alias": "(Mouse Vip)-like", "cell_set_label": "RNAseq 15-25", "cell_set_accession": "CS201912132_97", "cell_set_aligned_alias": "Vip", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Fenna Krienen", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Marmoset", "modality": "RNAseq", "taxonomy_id": "CCN201912132", "taxonomy_description": "Marmoset M1 taxonomy using 10X data", "child_cell_set_accessions": "CS201912132_15|CS201912132_16|CS201912132_17|CS201912132_18|CS201912132_19|CS201912132_20|CS201912132_21|CS201912132_22|CS201912132_23|CS201912132_24|CS201912132_25", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#B864CC"}" @default.
- CS201912132_97 PCL_0010051 "Subclass" @default.
- CS201912132_97 PCL_0010059 "CS201912132_97" @default.
- CS201912132_97 RO_0015003 CS201912132_147 @default.
- CS201912132_97 hasExactSynonym "Vip" @default.
- CS201912132_97 hasRelatedSynonym "Vip" @default.
- CS201912132_97 type B0993858affec7f73e5b6a02e14213f40 @default.
- CS201912132_97 type Bc30764140fe9240842b653a01aa01e52 @default.
- CS201912132_97 type PCL_0010001 @default.
- CS201912132_97 type NamedIndividual @default.
- CS201912132_97 comment "Vip is: CGE/PoA-derived GABAergic subclass typically expressing Vip. In Marmoset primary motor cortex (CCN201912132), Vip has 11 child types: Inh VIP THSD7B, Inh VIP LOC100397259, Inh GAD1 NPSR1, Inh SNCG LOC108587895, Inh VIP LOC108589153, Inh VIP FIGN, Inh VIP GPR149, Inh VIP LOC108588071, Inh VIP VAT1L, Inh VIP CIT and Inh VIP LOC108588539. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is LOC103791740 and LOC108588071 (F-beta = 0.746), based on the NS Forest method of marker gene selection. Vip cells represent 0.239897604680929% of all GABAergic cells collected in the marmoset M1 10Xv3 dataset. Vip cells have an average of 3183 genes detected, which is 369 less than the average for all GABAergic cells (3552)." @default.
- CS201912132_97 isDefinedBy cs201912132.owl @default.
- CS201912132_97 label "RNAseq 15-25 - CS201912132_97" @default.
- CS201912132_97 prefLabel "(Mouse Vip)-like" @default.