Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS201912132_98> ?p ?o ?g. }
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- CS201912132_98 cell_set_alias_assignee "Fenna Krienen" @default.
- CS201912132_98 cell_set_alias_citation "PMID:34616062" @default.
- CS201912132_98 cell_set_aligned_alias "Sst" @default.
- CS201912132_98 cell_set_label "RNAseq 27-40, 47" @default.
- CS201912132_98 cell_set_preferred_alias "(Mouse Sst)-like" @default.
- CS201912132_98 node_metadata "{"cell_set_preferred_alias": "(Mouse Sst)-like", "cell_set_label": "RNAseq 27-40, 47", "cell_set_accession": "CS201912132_98", "cell_set_aligned_alias": "Sst", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Fenna Krienen", "cell_set_alias_citation": "PMID:34616062", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Marmoset", "modality": "RNAseq", "taxonomy_id": "CCN201912132", "taxonomy_description": "Marmoset M1 taxonomy using 10X data", "child_cell_set_accessions": "CS201912132_27|CS201912132_28|CS201912132_29|CS201912132_30|CS201912132_31|CS201912132_32|CS201912132_33|CS201912132_34|CS201912132_35|CS201912132_36|CS201912132_37|CS201912132_38|CS201912132_39|CS201912132_40|CS201912132_47", "cell_type_card": "Subclass", "original_label": "", "cell_set_color": "#FF9900"}" @default.
- CS201912132_98 PCL_0010051 "Subclass" @default.
- CS201912132_98 PCL_0010059 "CS201912132_98" @default.
- CS201912132_98 RO_0015003 CS201912132_161 @default.
- CS201912132_98 hasExactSynonym "Sst" @default.
- CS201912132_98 hasRelatedSynonym "Sst" @default.
- CS201912132_98 type B9ffad4aba10d368bbcf60029ed603ec3 @default.
- CS201912132_98 type Ba9b4b49d750beda313df724f1eb7778e @default.
- CS201912132_98 type PCL_0010001 @default.
- CS201912132_98 type NamedIndividual @default.
- CS201912132_98 comment "Sst is: MGE-derived GABAergic subclass typically expressing Sst. In Marmoset primary motor cortex (CCN201912132), Sst has 15 child types: Inh SST LOC108589054, Inh SST LOC108588801, Inh SST LOC103788138, Inh SST MPP5, Inh SST KIRREL3, Inh SST LOC103788660, Inh SST CBLN4, Inh SST ABI3BP, Inh SST TMEFF2, Inh SST P4HA1, Inh SST LTBP1, Inh SST AIM1, Inh SST VAPA, Inh SST PCSK5 and Inh PVALB SST LRRC6. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is ABI3BP and NXPH1 (F-beta = 0.778), based on the NS Forest method of marker gene selection. Sst cells represent 0.288809654415798% of all GABAergic cells collected in the marmoset M1 10Xv3 dataset. Sst cells have an average of 3298 genes detected, which is 254 less than the average for all GABAergic cells (3552)." @default.
- CS201912132_98 isDefinedBy cs201912132.owl @default.
- CS201912132_98 label "RNAseq 27-40, 47 - CS201912132_98" @default.
- CS201912132_98 prefLabel "(Mouse Sst)-like" @default.