Matches in Ubergraph for { <http://purl.obolibrary.org/obo/pcl/CS202002013_12> ?p ?o ?g. }
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- CS202002013_12 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_12 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_12 cell_set_label "RNAseq 012" @default.
- CS202002013_12 cell_set_preferred_alias "Sncg Calb1_2" @default.
- CS202002013_12 node_metadata "{"cell_set_preferred_alias": "Sncg Calb1_2", "original_label": "Sncg Calb1_2", "cell_set_label": "RNAseq 012", "cell_set_accession": "CS202002013_12", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#9900B3"}" @default.
- CS202002013_12 original_label "Sncg Calb1_2" @default.
- CS202002013_12 PCL_0010051 "Cell Type" @default.
- CS202002013_12 PCL_0010059 "CS202002013_12" @default.
- CS202002013_12 RO_0015003 CS202002013_136 @default.
- CS202002013_12 hasRelatedSynonym "Large CCK basket cell" @default.
- CS202002013_12 hasRelatedSynonym "Sncg-like_C3" @default.
- CS202002013_12 type B9583b9b146e21d0f11e2f80f7afe5cbf @default.
- CS202002013_12 type Bb23437020adbd7dd087d26467c5ad1a4 @default.
- CS202002013_12 type PCL_0010001 @default.
- CS202002013_12 type NamedIndividual @default.
- CS202002013_12 comment "In Mouse primary motor cortex (CCN202002013), Sncg Calb1_2 is a member of the Sncg subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Calb1 and Epb41l4a and Syt6 (F-beta = 0.674), based on the NS Forest method of marker gene selection. Sncg Calb1_2 cells represent 5.65% of all Sncg cells collected in the snRNA-seq 10X v3 B dataset. Sncg Calb1_2 cells have an average of 5226 genes detected, which is 163 more than the average for all Sncg cells (5063). Sncg Calb1_2 cells have an average firing rate of 29.17 Hz, compared to 30.38 Hz for all Sncg cells recorded. Other distinguishing features include an input resistance of 343.91 MOhms (368.39 MOhms in all Sncg cells), and upstroke:downstroke ratio of 2.28 (2.41 for all Sncg cells). The most distinguishing morpholgical features of Sncg Calb1_2, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.92 vs. 0.3 average for all Sncg cells), axon total length (2699.85 vs. 7744.27 microns for all Sncg cells), dendrite total length (2959.8 vs. 2212.98 microns for all Sncg cells), and stems (6 vs. 5.83 for all Sncg cells)." @default.
- CS202002013_12 isDefinedBy cs202002013.owl @default.
- CS202002013_12 label "RNAseq 012 - CS202002013_12" @default.
- CS202002013_12 prefLabel "Sncg Calb1_2" @default.