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- CS202002013_13 cell_set_alias_assignee "Zizhen Yao" @default.
- CS202002013_13 cell_set_alias_citation "PMID:34616066" @default.
- CS202002013_13 cell_set_label "RNAseq 013" @default.
- CS202002013_13 cell_set_preferred_alias "Sncg Npy2r" @default.
- CS202002013_13 node_metadata "{"cell_set_preferred_alias": "Sncg Npy2r", "original_label": "Sncg Npy2r", "cell_set_label": "RNAseq 013", "cell_set_accession": "CS202002013_13", "cell_set_aligned_alias": "", "cell_set_additional_aliases": "", "cell_set_alias_assignee": "Zizhen Yao", "cell_set_alias_citation": "PMID:34616066", "cell_set_structure": "primary motor cortex", "cell_set_ontology_tag": "UBERON:0001384", "species": "Mouse", "modality": "RNAseq", "taxonomy_id": "CCN202002013", "taxonomy_description": "Mouse MOp BICCN taxonomy using multiple RNA-Seq datasets ", "child_cell_set_accessions": "", "cell_type_card": "Cell Type", "cell_set_color": "#7A0099"}" @default.
- CS202002013_13 original_label "Sncg Npy2r" @default.
- CS202002013_13 PCL_0010051 "Cell Type" @default.
- CS202002013_13 PCL_0010059 "CS202002013_13" @default.
- CS202002013_13 RO_0015003 CS202002013_137 @default.
- CS202002013_13 RO_0015003 CS202002013_239 @default.
- CS202002013_13 hasRelatedSynonym "Sncg-like_C3" @default.
- CS202002013_13 type Bb7464f59adc4b30ea06ac377eaec2669 @default.
- CS202002013_13 type Bc2630e5453c8c48f6306a15b3cc6c0d8 @default.
- CS202002013_13 type PCL_0010001 @default.
- CS202002013_13 type NamedIndividual @default.
- CS202002013_13 comment "In Mouse primary motor cortex (CCN202002013), Sncg Npy2r is a member of the Sncg subclass. The minimal set of markers required to distinguish this cell type from other cell types in the primary motor cortex is Npy2r and Rgs12 (F-beta = 0.723), based on the NS Forest method of marker gene selection. Sncg Npy2r cells represent 27.84% of all Sncg cells collected in the snRNA-seq 10X v3 B dataset. Sncg Npy2r cells have an average of 4833 genes detected, which is 230 less than the average for all Sncg cells (5063). Sncg Npy2r cells have an average firing rate of 30 Hz, compared to 30.38 Hz for all Sncg cells recorded. Other distinguishing features include an input resistance of 477.78 MOhms (368.39 MOhms in all Sncg cells), and upstroke:downstroke ratio of 2.2 (2.41 for all Sncg cells). The most distinguishing morpholgical features of Sncg Npy2r, as determined by reconstructions from Patch-seq data, are normalized cortical depth (0.09 vs. 0.3 average for all Sncg cells), axon total length (9172.33 vs. 7744.27 microns for all Sncg cells), dendrite total length (1260.9 vs. 2212.98 microns for all Sncg cells), and stems (5.5 vs. 5.83 for all Sncg cells)." @default.
- CS202002013_13 isDefinedBy cs202002013.owl @default.
- CS202002013_13 label "RNAseq 013 - CS202002013_13" @default.
- CS202002013_13 prefLabel "Sncg Npy2r" @default.